Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cpne1Q8C166 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpne1Q8C166 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cpne1Q8C166 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpne1Q8C166 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Cpne1Q8C166 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Cpne1Q8C166 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.6■□□□□ 0.09
Cpne1Q8C166 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Cpne1Q8C166 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.6■□□□□ 0.09
Cpne1Q8C166 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpne1Q8C166 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpne1Q8C166 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cpne1Q8C166 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Cpne1Q8C166 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpne1Q8C166 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.59■□□□□ 0.09
Cpne1Q8C166 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cpne1Q8C166 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.59■□□□□ 0.09
Cpne1Q8C166 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpne1Q8C166 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Cpne1Q8C166 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.59■□□□□ 0.09
Cpne1Q8C166 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpne1Q8C166 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.59■□□□□ 0.09
Cpne1Q8C166 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.59■□□□□ 0.09
Cpne1Q8C166 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cpne1Q8C166 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.59■□□□□ 0.09
Cpne1Q8C166 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.59■□□□□ 0.09
Cpne1Q8C166 Gm7213-201ENSMUST00000215977 950 ntBASIC15.59■□□□□ 0.09
Cpne1Q8C166 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpne1Q8C166 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpne1Q8C166 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Cpne1Q8C166 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpne1Q8C166 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpne1Q8C166 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpne1Q8C166 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cpne1Q8C166 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cpne1Q8C166 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Cpne1Q8C166 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Cpne1Q8C166 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cpne1Q8C166 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cpne1Q8C166 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cpne1Q8C166 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpne1Q8C166 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpne1Q8C166 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Cpne1Q8C166 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpne1Q8C166 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
Cpne1Q8C166 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cpne1Q8C166 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cpne1Q8C166 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cpne1Q8C166 Gm10231-201ENSMUST00000181584 441 ntBASIC15.58■□□□□ 0.08
Cpne1Q8C166 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpne1Q8C166 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cpne1Q8C166 Gm10175-202ENSMUST00000208752 441 ntBASIC15.58■□□□□ 0.08
Cpne1Q8C166 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cpne1Q8C166 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Cpne1Q8C166 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpne1Q8C166 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Cpne1Q8C166 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.58■□□□□ 0.08
Cpne1Q8C166 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpne1Q8C166 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpne1Q8C166 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpne1Q8C166 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpne1Q8C166 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Cpne1Q8C166 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Cpne1Q8C166 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpne1Q8C166 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpne1Q8C166 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Cpne1Q8C166 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.57■□□□□ 0.08
Cpne1Q8C166 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.57■□□□□ 0.08
Cpne1Q8C166 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Cpne1Q8C166 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Cpne1Q8C166 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Cpne1Q8C166 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpne1Q8C166 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpne1Q8C166 Gm13216-201ENSMUST00000117145 591 ntBASIC15.57■□□□□ 0.08
Cpne1Q8C166 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpne1Q8C166 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpne1Q8C166 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.57■□□□□ 0.08
Cpne1Q8C166 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpne1Q8C166 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpne1Q8C166 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cpne1Q8C166 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Cpne1Q8C166 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpne1Q8C166 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cpne1Q8C166 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpne1Q8C166 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Cpne1Q8C166 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpne1Q8C166 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpne1Q8C166 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.56■□□□□ 0.08
Cpne1Q8C166 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.56■□□□□ 0.08
Cpne1Q8C166 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpne1Q8C166 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpne1Q8C166 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.56■□□□□ 0.08
Cpne1Q8C166 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cpne1Q8C166 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpne1Q8C166 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cpne1Q8C166 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpne1Q8C166 Gm10566-201ENSMUST00000086739 996 ntBASIC15.56■□□□□ 0.08
Cpne1Q8C166 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpne1Q8C166 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpne1Q8C166 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms