Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim35Q8C006 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim35Q8C006 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim35Q8C006 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim35Q8C006 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim35Q8C006 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.32■□□□□ 0.36
Trim35Q8C006 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim35Q8C006 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim35Q8C006 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim35Q8C006 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim35Q8C006 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim35Q8C006 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim35Q8C006 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trim35Q8C006 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim35Q8C006 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.32■□□□□ 0.36
Trim35Q8C006 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.32■□□□□ 0.36
Trim35Q8C006 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Trim35Q8C006 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.32■□□□□ 0.36
Trim35Q8C006 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim35Q8C006 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trim35Q8C006 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Trim35Q8C006 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim35Q8C006 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim35Q8C006 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trim35Q8C006 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim35Q8C006 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim35Q8C006 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim35Q8C006 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim35Q8C006 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Trim35Q8C006 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim35Q8C006 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim35Q8C006 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim35Q8C006 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim35Q8C006 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim35Q8C006 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim35Q8C006 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim35Q8C006 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim35Q8C006 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim35Q8C006 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim35Q8C006 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim35Q8C006 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim35Q8C006 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC17.31■□□□□ 0.36
Trim35Q8C006 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim35Q8C006 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.31■□□□□ 0.36
Trim35Q8C006 Gm44548-201ENSMUST00000208929 192 ntBASIC17.31■□□□□ 0.36
Trim35Q8C006 Gm45701-201ENSMUST00000212049 235 ntBASIC17.31■□□□□ 0.36
Trim35Q8C006 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.31■□□□□ 0.36
Trim35Q8C006 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.31■□□□□ 0.36
Trim35Q8C006 Gm18829-201ENSMUST00000188150 1622 ntBASIC17.31■□□□□ 0.36
Trim35Q8C006 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim35Q8C006 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim35Q8C006 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim35Q8C006 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim35Q8C006 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trim35Q8C006 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim35Q8C006 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim35Q8C006 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trim35Q8C006 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim35Q8C006 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim35Q8C006 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim35Q8C006 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
Trim35Q8C006 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Trim35Q8C006 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim35Q8C006 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim35Q8C006 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim35Q8C006 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.3■□□□□ 0.36
Trim35Q8C006 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.3■□□□□ 0.36
Trim35Q8C006 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.3■□□□□ 0.36
Trim35Q8C006 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.3■□□□□ 0.36
Trim35Q8C006 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim35Q8C006 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.3■□□□□ 0.36
Trim35Q8C006 Gm44830-201ENSMUST00000207667 584 ntBASIC17.3■□□□□ 0.36
Trim35Q8C006 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.3■□□□□ 0.36
Trim35Q8C006 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim35Q8C006 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim35Q8C006 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Trim35Q8C006 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Trim35Q8C006 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim35Q8C006 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trim35Q8C006 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim35Q8C006 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim35Q8C006 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim35Q8C006 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim35Q8C006 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim35Q8C006 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Trim35Q8C006 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim35Q8C006 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim35Q8C006 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim35Q8C006 Gm25295-201ENSMUST00000122794 306 ntBASIC17.29■□□□□ 0.36
Trim35Q8C006 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC17.29■□□□□ 0.36
Trim35Q8C006 Mir2861-201ENSMUST00000175539 82 ntBASIC17.29■□□□□ 0.36
Trim35Q8C006 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.29■□□□□ 0.36
Trim35Q8C006 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim35Q8C006 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC17.29■□□□□ 0.36
Trim35Q8C006 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC17.29■□□□□ 0.36
Trim35Q8C006 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim35Q8C006 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim35Q8C006 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim35Q8C006 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim35Q8C006 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms