Protein–RNA interactions for Protein: Q8BXS2

Tnfsfm13, Tumor necrosis factor (ligand) superfamily, membrane-bound member 13, mousemouse

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsfm13Q8BXS2 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfsfm13Q8BXS2 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.89□□□□□ -0.03
Tnfsfm13Q8BXS2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.89□□□□□ -0.03
Tnfsfm13Q8BXS2 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfsfm13Q8BXS2 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfsfm13Q8BXS2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfsfm13Q8BXS2 Gm715-201ENSMUST00000117865 831 ntBASIC14.89□□□□□ -0.03
Tnfsfm13Q8BXS2 Gm7638-201ENSMUST00000121348 967 ntBASIC14.89□□□□□ -0.03
Tnfsfm13Q8BXS2 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.89□□□□□ -0.03
Tnfsfm13Q8BXS2 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Tnfsfm13Q8BXS2 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfsfm13Q8BXS2 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Tnfsfm13Q8BXS2 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfsfm13Q8BXS2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfsfm13Q8BXS2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Tnfsfm13Q8BXS2 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfsfm13Q8BXS2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfsfm13Q8BXS2 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfsfm13Q8BXS2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfsfm13Q8BXS2 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfsfm13Q8BXS2 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfsfm13Q8BXS2 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfsfm13Q8BXS2 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfsfm13Q8BXS2 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfsfm13Q8BXS2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Tnfsfm13Q8BXS2 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfsfm13Q8BXS2 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfsfm13Q8BXS2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfsfm13Q8BXS2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfsfm13Q8BXS2 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.88□□□□□ -0.03
Tnfsfm13Q8BXS2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.88□□□□□ -0.03
Tnfsfm13Q8BXS2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.88□□□□□ -0.03
Tnfsfm13Q8BXS2 Gm9731-201ENSMUST00000209480 747 ntBASIC14.88□□□□□ -0.03
Tnfsfm13Q8BXS2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.88□□□□□ -0.03
Tnfsfm13Q8BXS2 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfsfm13Q8BXS2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Tnfsfm13Q8BXS2 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfsfm13Q8BXS2 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfsfm13Q8BXS2 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfsfm13Q8BXS2 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Tnfsfm13Q8BXS2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Tnfsfm13Q8BXS2 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfsfm13Q8BXS2 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfsfm13Q8BXS2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfsfm13Q8BXS2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfsfm13Q8BXS2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfsfm13Q8BXS2 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Tnfsfm13Q8BXS2 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Tnfsfm13Q8BXS2 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.87□□□□□ -0.03
Tnfsfm13Q8BXS2 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Tnfsfm13Q8BXS2 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.87□□□□□ -0.03
Tnfsfm13Q8BXS2 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfsfm13Q8BXS2 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfsfm13Q8BXS2 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Tnfsfm13Q8BXS2 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Tnfsfm13Q8BXS2 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfsfm13Q8BXS2 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
Tnfsfm13Q8BXS2 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfsfm13Q8BXS2 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.87□□□□□ -0.03
Tnfsfm13Q8BXS2 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfsfm13Q8BXS2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfsfm13Q8BXS2 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfsfm13Q8BXS2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfsfm13Q8BXS2 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.87□□□□□ -0.03
Tnfsfm13Q8BXS2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfsfm13Q8BXS2 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.87□□□□□ -0.03
Tnfsfm13Q8BXS2 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfsfm13Q8BXS2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfsfm13Q8BXS2 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfsfm13Q8BXS2 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfsfm13Q8BXS2 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfsfm13Q8BXS2 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfsfm13Q8BXS2 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.87□□□□□ -0.03
Tnfsfm13Q8BXS2 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsfm13Q8BXS2 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsfm13Q8BXS2 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsfm13Q8BXS2 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.86□□□□□ -0.03
Tnfsfm13Q8BXS2 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Tnfsfm13Q8BXS2 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Tnfsfm13Q8BXS2 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsfm13Q8BXS2 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsfm13Q8BXS2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsfm13Q8BXS2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsfm13Q8BXS2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsfm13Q8BXS2 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsfm13Q8BXS2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsfm13Q8BXS2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Tnfsfm13Q8BXS2 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsfm13Q8BXS2 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.86□□□□□ -0.03
Tnfsfm13Q8BXS2 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.86□□□□□ -0.03
Tnfsfm13Q8BXS2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.86□□□□□ -0.03
Tnfsfm13Q8BXS2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsfm13Q8BXS2 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsfm13Q8BXS2 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsfm13Q8BXS2 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsfm13Q8BXS2 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsfm13Q8BXS2 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsfm13Q8BXS2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsfm13Q8BXS2 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfsfm13Q8BXS2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms