Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rd3Q8BRE0 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.68■□□□□ 0.42
Rd3Q8BRE0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rd3Q8BRE0 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rd3Q8BRE0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rd3Q8BRE0 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rd3Q8BRE0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rd3Q8BRE0 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rd3Q8BRE0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rd3Q8BRE0 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rd3Q8BRE0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.68■□□□□ 0.42
Rd3Q8BRE0 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.68■□□□□ 0.42
Rd3Q8BRE0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rd3Q8BRE0 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rd3Q8BRE0 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.67■□□□□ 0.42
Rd3Q8BRE0 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rd3Q8BRE0 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rd3Q8BRE0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rd3Q8BRE0 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rd3Q8BRE0 Gm13884-201ENSMUST00000118103 829 ntBASIC17.67■□□□□ 0.42
Rd3Q8BRE0 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rd3Q8BRE0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rd3Q8BRE0 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rd3Q8BRE0 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rd3Q8BRE0 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rd3Q8BRE0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rd3Q8BRE0 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rd3Q8BRE0 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rd3Q8BRE0 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rd3Q8BRE0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rd3Q8BRE0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rd3Q8BRE0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rd3Q8BRE0 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rd3Q8BRE0 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Rd3Q8BRE0 Gm10052-201ENSMUST00000168019 960 ntBASIC17.66■□□□□ 0.42
Rd3Q8BRE0 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rd3Q8BRE0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.66■□□□□ 0.42
Rd3Q8BRE0 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rd3Q8BRE0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rd3Q8BRE0 Gm7729-201ENSMUST00000050143 801 ntBASIC17.66■□□□□ 0.42
Rd3Q8BRE0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rd3Q8BRE0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rd3Q8BRE0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.66■□□□□ 0.42
Rd3Q8BRE0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rd3Q8BRE0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rd3Q8BRE0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rd3Q8BRE0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rd3Q8BRE0 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rd3Q8BRE0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rd3Q8BRE0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rd3Q8BRE0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rd3Q8BRE0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rd3Q8BRE0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.65■□□□□ 0.42
Rd3Q8BRE0 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.65■□□□□ 0.42
Rd3Q8BRE0 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.65■□□□□ 0.42
Rd3Q8BRE0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rd3Q8BRE0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rd3Q8BRE0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.65■□□□□ 0.42
Rd3Q8BRE0 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rd3Q8BRE0 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rd3Q8BRE0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rd3Q8BRE0 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rd3Q8BRE0 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rd3Q8BRE0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Rd3Q8BRE0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rd3Q8BRE0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rd3Q8BRE0 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rd3Q8BRE0 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rd3Q8BRE0 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.64■□□□□ 0.41
Rd3Q8BRE0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rd3Q8BRE0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.64■□□□□ 0.41
Rd3Q8BRE0 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rd3Q8BRE0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.64■□□□□ 0.41
Rd3Q8BRE0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rd3Q8BRE0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rd3Q8BRE0 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rd3Q8BRE0 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rd3Q8BRE0 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.64■□□□□ 0.41
Rd3Q8BRE0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Rd3Q8BRE0 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rd3Q8BRE0 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rd3Q8BRE0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rd3Q8BRE0 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rd3Q8BRE0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Rd3Q8BRE0 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rd3Q8BRE0 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Rd3Q8BRE0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Rd3Q8BRE0 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rd3Q8BRE0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rd3Q8BRE0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.63■□□□□ 0.41
Rd3Q8BRE0 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rd3Q8BRE0 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Rd3Q8BRE0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rd3Q8BRE0 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rd3Q8BRE0 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rd3Q8BRE0 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rd3Q8BRE0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rd3Q8BRE0 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rd3Q8BRE0 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
Rd3Q8BRE0 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms