Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sfr1Q8BP27 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sfr1Q8BP27 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sfr1Q8BP27 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Sfr1Q8BP27 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Sfr1Q8BP27 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sfr1Q8BP27 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.96■□□□□ 0.31
Sfr1Q8BP27 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Sfr1Q8BP27 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.96■□□□□ 0.31
Sfr1Q8BP27 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
Sfr1Q8BP27 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sfr1Q8BP27 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sfr1Q8BP27 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sfr1Q8BP27 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sfr1Q8BP27 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sfr1Q8BP27 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.96■□□□□ 0.31
Sfr1Q8BP27 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Sfr1Q8BP27 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sfr1Q8BP27 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sfr1Q8BP27 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sfr1Q8BP27 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sfr1Q8BP27 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sfr1Q8BP27 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sfr1Q8BP27 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sfr1Q8BP27 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sfr1Q8BP27 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sfr1Q8BP27 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sfr1Q8BP27 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.96■□□□□ 0.3
Sfr1Q8BP27 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sfr1Q8BP27 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sfr1Q8BP27 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
Sfr1Q8BP27 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Sfr1Q8BP27 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sfr1Q8BP27 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sfr1Q8BP27 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sfr1Q8BP27 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.95■□□□□ 0.3
Sfr1Q8BP27 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Sfr1Q8BP27 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sfr1Q8BP27 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sfr1Q8BP27 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Sfr1Q8BP27 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sfr1Q8BP27 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sfr1Q8BP27 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sfr1Q8BP27 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Sfr1Q8BP27 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sfr1Q8BP27 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Sfr1Q8BP27 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sfr1Q8BP27 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sfr1Q8BP27 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sfr1Q8BP27 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Sfr1Q8BP27 Actl10-202ENSMUST00000226583 1501 ntBASIC16.95■□□□□ 0.3
Sfr1Q8BP27 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Sfr1Q8BP27 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sfr1Q8BP27 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sfr1Q8BP27 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
Sfr1Q8BP27 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sfr1Q8BP27 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Sfr1Q8BP27 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sfr1Q8BP27 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Sfr1Q8BP27 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sfr1Q8BP27 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Sfr1Q8BP27 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sfr1Q8BP27 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sfr1Q8BP27 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.94■□□□□ 0.3
Sfr1Q8BP27 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sfr1Q8BP27 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sfr1Q8BP27 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sfr1Q8BP27 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sfr1Q8BP27 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sfr1Q8BP27 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sfr1Q8BP27 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sfr1Q8BP27 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Sfr1Q8BP27 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sfr1Q8BP27 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Sfr1Q8BP27 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sfr1Q8BP27 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sfr1Q8BP27 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sfr1Q8BP27 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sfr1Q8BP27 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sfr1Q8BP27 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sfr1Q8BP27 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sfr1Q8BP27 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sfr1Q8BP27 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Sfr1Q8BP27 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sfr1Q8BP27 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sfr1Q8BP27 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Sfr1Q8BP27 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sfr1Q8BP27 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sfr1Q8BP27 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sfr1Q8BP27 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.93■□□□□ 0.3
Sfr1Q8BP27 Gm21559-201ENSMUST00000220638 855 ntBASIC16.93■□□□□ 0.3
Sfr1Q8BP27 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sfr1Q8BP27 Gm8587-201ENSMUST00000076538 843 ntBASIC16.93■□□□□ 0.3
Sfr1Q8BP27 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sfr1Q8BP27 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Sfr1Q8BP27 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sfr1Q8BP27 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sfr1Q8BP27 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sfr1Q8BP27 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.93■□□□□ 0.3
Sfr1Q8BP27 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms