Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Samm50Q8BGH2 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Samm50Q8BGH2 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Samm50Q8BGH2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Samm50Q8BGH2 Gm24841-201ENSMUST00000158676 357 ntBASIC19.56■□□□□ 0.72
Samm50Q8BGH2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.56■□□□□ 0.72
Samm50Q8BGH2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Samm50Q8BGH2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Samm50Q8BGH2 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Samm50Q8BGH2 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Samm50Q8BGH2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Samm50Q8BGH2 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Samm50Q8BGH2 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Samm50Q8BGH2 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Samm50Q8BGH2 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Samm50Q8BGH2 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Samm50Q8BGH2 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Samm50Q8BGH2 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Samm50Q8BGH2 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Samm50Q8BGH2 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.55■□□□□ 0.72
Samm50Q8BGH2 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Samm50Q8BGH2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Samm50Q8BGH2 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.55■□□□□ 0.72
Samm50Q8BGH2 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Samm50Q8BGH2 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Samm50Q8BGH2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Samm50Q8BGH2 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Samm50Q8BGH2 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Samm50Q8BGH2 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Samm50Q8BGH2 Gm13836-201ENSMUST00000121159 501 ntBASIC19.55■□□□□ 0.72
Samm50Q8BGH2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Samm50Q8BGH2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Samm50Q8BGH2 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Samm50Q8BGH2 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Samm50Q8BGH2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Samm50Q8BGH2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Samm50Q8BGH2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Samm50Q8BGH2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Samm50Q8BGH2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Samm50Q8BGH2 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Samm50Q8BGH2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Samm50Q8BGH2 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Samm50Q8BGH2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Samm50Q8BGH2 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Samm50Q8BGH2 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Samm50Q8BGH2 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Samm50Q8BGH2 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Samm50Q8BGH2 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC19.54■□□□□ 0.72
Samm50Q8BGH2 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Samm50Q8BGH2 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Samm50Q8BGH2 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Samm50Q8BGH2 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Samm50Q8BGH2 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Samm50Q8BGH2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.54■□□□□ 0.72
Samm50Q8BGH2 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Samm50Q8BGH2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.54■□□□□ 0.72
Samm50Q8BGH2 Gm11539-201ENSMUST00000119837 557 ntBASIC19.54■□□□□ 0.72
Samm50Q8BGH2 Gm13436-201ENSMUST00000120418 567 ntBASIC19.54■□□□□ 0.72
Samm50Q8BGH2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Samm50Q8BGH2 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Samm50Q8BGH2 Gm27463-201ENSMUST00000183569 57 ntBASIC19.54■□□□□ 0.72
Samm50Q8BGH2 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Samm50Q8BGH2 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Samm50Q8BGH2 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Samm50Q8BGH2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Samm50Q8BGH2 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Samm50Q8BGH2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Samm50Q8BGH2 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Samm50Q8BGH2 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Samm50Q8BGH2 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Samm50Q8BGH2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Samm50Q8BGH2 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Samm50Q8BGH2 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Samm50Q8BGH2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Samm50Q8BGH2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Samm50Q8BGH2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Samm50Q8BGH2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Samm50Q8BGH2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Samm50Q8BGH2 Gm6433-201ENSMUST00000118634 875 ntBASIC19.53■□□□□ 0.72
Samm50Q8BGH2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Samm50Q8BGH2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Samm50Q8BGH2 Gm9987-201ENSMUST00000069768 567 ntBASIC19.53■□□□□ 0.72
Samm50Q8BGH2 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19.53■□□□□ 0.72
Samm50Q8BGH2 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Samm50Q8BGH2 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Samm50Q8BGH2 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Samm50Q8BGH2 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Samm50Q8BGH2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Samm50Q8BGH2 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Samm50Q8BGH2 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Samm50Q8BGH2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Samm50Q8BGH2 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Samm50Q8BGH2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Samm50Q8BGH2 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.53■□□□□ 0.72
Samm50Q8BGH2 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Samm50Q8BGH2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Samm50Q8BGH2 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Samm50Q8BGH2 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Samm50Q8BGH2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Samm50Q8BGH2 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms