Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim65Q8BFW4 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim65Q8BFW4 Gm13186-201ENSMUST00000118031 316 ntBASIC17.87■□□□□ 0.45
Trim65Q8BFW4 Mir5130-201ENSMUST00000175160 84 ntBASIC17.87■□□□□ 0.45
Trim65Q8BFW4 Gm7213-201ENSMUST00000215977 950 ntBASIC17.87■□□□□ 0.45
Trim65Q8BFW4 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim65Q8BFW4 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim65Q8BFW4 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim65Q8BFW4 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.87■□□□□ 0.45
Trim65Q8BFW4 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.87■□□□□ 0.45
Trim65Q8BFW4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim65Q8BFW4 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trim65Q8BFW4 Actl10-202ENSMUST00000226583 1501 ntBASIC17.87■□□□□ 0.45
Trim65Q8BFW4 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim65Q8BFW4 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
Trim65Q8BFW4 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim65Q8BFW4 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Trim65Q8BFW4 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim65Q8BFW4 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Trim65Q8BFW4 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Trim65Q8BFW4 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Trim65Q8BFW4 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.86■□□□□ 0.45
Trim65Q8BFW4 Mir7071-201ENSMUST00000184847 69 ntBASIC17.86■□□□□ 0.45
Trim65Q8BFW4 Gm18959-201ENSMUST00000208954 655 ntBASIC17.86■□□□□ 0.45
Trim65Q8BFW4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim65Q8BFW4 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim65Q8BFW4 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Trim65Q8BFW4 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim65Q8BFW4 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.86■□□□□ 0.45
Trim65Q8BFW4 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim65Q8BFW4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Trim65Q8BFW4 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim65Q8BFW4 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim65Q8BFW4 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.86■□□□□ 0.45
Trim65Q8BFW4 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim65Q8BFW4 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.86■□□□□ 0.45
Trim65Q8BFW4 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim65Q8BFW4 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim65Q8BFW4 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trim65Q8BFW4 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trim65Q8BFW4 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim65Q8BFW4 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trim65Q8BFW4 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim65Q8BFW4 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim65Q8BFW4 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trim65Q8BFW4 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.85■□□□□ 0.45
Trim65Q8BFW4 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trim65Q8BFW4 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trim65Q8BFW4 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.85■□□□□ 0.45
Trim65Q8BFW4 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim65Q8BFW4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.85■□□□□ 0.45
Trim65Q8BFW4 Gm45058-201ENSMUST00000205810 766 ntBASIC17.85■□□□□ 0.45
Trim65Q8BFW4 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.85■□□□□ 0.45
Trim65Q8BFW4 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trim65Q8BFW4 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim65Q8BFW4 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trim65Q8BFW4 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim65Q8BFW4 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim65Q8BFW4 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim65Q8BFW4 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trim65Q8BFW4 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim65Q8BFW4 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim65Q8BFW4 Gm10566-201ENSMUST00000086739 996 ntBASIC17.85■□□□□ 0.45
Trim65Q8BFW4 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim65Q8BFW4 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trim65Q8BFW4 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Trim65Q8BFW4 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim65Q8BFW4 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.85■□□□□ 0.45
Trim65Q8BFW4 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trim65Q8BFW4 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim65Q8BFW4 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim65Q8BFW4 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim65Q8BFW4 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim65Q8BFW4 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim65Q8BFW4 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim65Q8BFW4 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Trim65Q8BFW4 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim65Q8BFW4 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim65Q8BFW4 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim65Q8BFW4 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim65Q8BFW4 Gm6433-201ENSMUST00000118634 875 ntBASIC17.84■□□□□ 0.45
Trim65Q8BFW4 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim65Q8BFW4 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trim65Q8BFW4 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim65Q8BFW4 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim65Q8BFW4 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trim65Q8BFW4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim65Q8BFW4 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim65Q8BFW4 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim65Q8BFW4 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim65Q8BFW4 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim65Q8BFW4 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trim65Q8BFW4 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim65Q8BFW4 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trim65Q8BFW4 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.83■□□□□ 0.45
Trim65Q8BFW4 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim65Q8BFW4 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim65Q8BFW4 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim65Q8BFW4 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim65Q8BFW4 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms