Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Upk3bQ80YF6 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk3bQ80YF6 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Upk3bQ80YF6 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk3bQ80YF6 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk3bQ80YF6 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk3bQ80YF6 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Upk3bQ80YF6 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk3bQ80YF6 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk3bQ80YF6 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Upk3bQ80YF6 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk3bQ80YF6 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk3bQ80YF6 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk3bQ80YF6 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk3bQ80YF6 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk3bQ80YF6 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk3bQ80YF6 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.13□□□□□ -0.15
Upk3bQ80YF6 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk3bQ80YF6 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk3bQ80YF6 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk3bQ80YF6 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk3bQ80YF6 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.13□□□□□ -0.15
Upk3bQ80YF6 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk3bQ80YF6 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk3bQ80YF6 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Upk3bQ80YF6 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Upk3bQ80YF6 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk3bQ80YF6 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.12□□□□□ -0.15
Upk3bQ80YF6 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk3bQ80YF6 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Upk3bQ80YF6 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.12□□□□□ -0.15
Upk3bQ80YF6 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk3bQ80YF6 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk3bQ80YF6 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Upk3bQ80YF6 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Upk3bQ80YF6 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC14.12□□□□□ -0.15
Upk3bQ80YF6 Gm37292-201ENSMUST00000192062 758 ntBASIC14.12□□□□□ -0.15
Upk3bQ80YF6 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.12□□□□□ -0.15
Upk3bQ80YF6 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk3bQ80YF6 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk3bQ80YF6 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk3bQ80YF6 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk3bQ80YF6 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk3bQ80YF6 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk3bQ80YF6 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk3bQ80YF6 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk3bQ80YF6 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk3bQ80YF6 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk3bQ80YF6 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Upk3bQ80YF6 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk3bQ80YF6 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk3bQ80YF6 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.11□□□□□ -0.15
Upk3bQ80YF6 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.11□□□□□ -0.15
Upk3bQ80YF6 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Upk3bQ80YF6 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk3bQ80YF6 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk3bQ80YF6 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk3bQ80YF6 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk3bQ80YF6 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.11□□□□□ -0.15
Upk3bQ80YF6 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.11□□□□□ -0.15
Upk3bQ80YF6 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Upk3bQ80YF6 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.11□□□□□ -0.15
Upk3bQ80YF6 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Upk3bQ80YF6 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.11□□□□□ -0.15
Upk3bQ80YF6 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.11□□□□□ -0.15
Upk3bQ80YF6 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk3bQ80YF6 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk3bQ80YF6 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk3bQ80YF6 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
Upk3bQ80YF6 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Upk3bQ80YF6 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Upk3bQ80YF6 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk3bQ80YF6 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk3bQ80YF6 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk3bQ80YF6 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Upk3bQ80YF6 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk3bQ80YF6 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk3bQ80YF6 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Upk3bQ80YF6 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk3bQ80YF6 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Upk3bQ80YF6 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk3bQ80YF6 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk3bQ80YF6 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Upk3bQ80YF6 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk3bQ80YF6 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Upk3bQ80YF6 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk3bQ80YF6 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Upk3bQ80YF6 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.1□□□□□ -0.15
Upk3bQ80YF6 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk3bQ80YF6 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk3bQ80YF6 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Upk3bQ80YF6 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Upk3bQ80YF6 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC14.1□□□□□ -0.15
Upk3bQ80YF6 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk3bQ80YF6 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk3bQ80YF6 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Upk3bQ80YF6 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Upk3bQ80YF6 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Upk3bQ80YF6 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk3bQ80YF6 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms