Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Gm5417-201ENSMUST00000079706 384 ntBASIC16.34■□□□□ 0.21
Ccdc116Q80X53 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc116Q80X53 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc116Q80X53 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.34■□□□□ 0.21
Ccdc116Q80X53 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc116Q80X53 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc116Q80X53 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc116Q80X53 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc116Q80X53 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc116Q80X53 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc116Q80X53 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Ccdc116Q80X53 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc116Q80X53 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc116Q80X53 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Ccdc116Q80X53 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.33■□□□□ 0.2
Ccdc116Q80X53 Gm7370-201ENSMUST00000219471 767 ntBASIC16.33■□□□□ 0.2
Ccdc116Q80X53 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc116Q80X53 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc116Q80X53 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc116Q80X53 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc116Q80X53 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc116Q80X53 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc116Q80X53 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc116Q80X53 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc116Q80X53 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc116Q80X53 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc116Q80X53 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc116Q80X53 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc116Q80X53 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc116Q80X53 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc116Q80X53 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc116Q80X53 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc116Q80X53 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc116Q80X53 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc116Q80X53 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc116Q80X53 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ccdc116Q80X53 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc116Q80X53 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc116Q80X53 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc116Q80X53 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc116Q80X53 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc116Q80X53 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc116Q80X53 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc116Q80X53 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc116Q80X53 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ccdc116Q80X53 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc116Q80X53 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc116Q80X53 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc116Q80X53 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc116Q80X53 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.32■□□□□ 0.2
Ccdc116Q80X53 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc116Q80X53 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc116Q80X53 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc116Q80X53 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc116Q80X53 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
Ccdc116Q80X53 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc116Q80X53 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc116Q80X53 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc116Q80X53 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
Ccdc116Q80X53 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Ccdc116Q80X53 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc116Q80X53 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc116Q80X53 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc116Q80X53 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc116Q80X53 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc116Q80X53 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc116Q80X53 Gm27463-201ENSMUST00000183569 57 ntBASIC16.31■□□□□ 0.2
Ccdc116Q80X53 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.31■□□□□ 0.2
Ccdc116Q80X53 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.31■□□□□ 0.2
Ccdc116Q80X53 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc116Q80X53 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ccdc116Q80X53 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc116Q80X53 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc116Q80X53 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc116Q80X53 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc116Q80X53 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.3■□□□□ 0.2
Ccdc116Q80X53 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc116Q80X53 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc116Q80X53 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc116Q80X53 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.3■□□□□ 0.2
Ccdc116Q80X53 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc116Q80X53 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Ccdc116Q80X53 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.3■□□□□ 0.2
Ccdc116Q80X53 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc116Q80X53 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.3■□□□□ 0.2
Ccdc116Q80X53 Gm37055-201ENSMUST00000191866 133 ntBASIC16.3■□□□□ 0.2
Ccdc116Q80X53 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.3■□□□□ 0.2
Ccdc116Q80X53 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc116Q80X53 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc116Q80X53 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc116Q80X53 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc116Q80X53 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc116Q80X53 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc116Q80X53 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc116Q80X53 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc116Q80X53 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.3■□□□□ 0.2
Ccdc116Q80X53 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.29■□□□□ 0.2
Ccdc116Q80X53 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc116Q80X53 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.29■□□□□ 0.2
Ccdc116Q80X53 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms