Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Pif1Q80SX8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pif1Q80SX8 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pif1Q80SX8 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pif1Q80SX8 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.35■□□□□ 0.05
Pif1Q80SX8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Pif1Q80SX8 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.35■□□□□ 0.05
Pif1Q80SX8 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pif1Q80SX8 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pif1Q80SX8 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.35■□□□□ 0.05
Pif1Q80SX8 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.35■□□□□ 0.05
Pif1Q80SX8 Gm43347-201ENSMUST00000200226 580 ntBASIC15.35■□□□□ 0.05
Pif1Q80SX8 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Pif1Q80SX8 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pif1Q80SX8 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.35■□□□□ 0.05
Pif1Q80SX8 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Pif1Q80SX8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pif1Q80SX8 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pif1Q80SX8 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pif1Q80SX8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.35■□□□□ 0.05
Pif1Q80SX8 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Pif1Q80SX8 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pif1Q80SX8 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pif1Q80SX8 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
Pif1Q80SX8 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pif1Q80SX8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pif1Q80SX8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pif1Q80SX8 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Pif1Q80SX8 Phf7-203ENSMUST00000226565 1971 ntBASIC15.35■□□□□ 0.05
Pif1Q80SX8 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pif1Q80SX8 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pif1Q80SX8 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pif1Q80SX8 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pif1Q80SX8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pif1Q80SX8 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pif1Q80SX8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Pif1Q80SX8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pif1Q80SX8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pif1Q80SX8 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pif1Q80SX8 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pif1Q80SX8 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Pif1Q80SX8 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pif1Q80SX8 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.34■□□□□ 0.05
Pif1Q80SX8 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pif1Q80SX8 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pif1Q80SX8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pif1Q80SX8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pif1Q80SX8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pif1Q80SX8 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pif1Q80SX8 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pif1Q80SX8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pif1Q80SX8 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pif1Q80SX8 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pif1Q80SX8 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.33■□□□□ 0.05
Pif1Q80SX8 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pif1Q80SX8 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pif1Q80SX8 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pif1Q80SX8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pif1Q80SX8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pif1Q80SX8 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pif1Q80SX8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pif1Q80SX8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pif1Q80SX8 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.33■□□□□ 0.04
Pif1Q80SX8 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pif1Q80SX8 Mir8098-201ENSMUST00000184011 137 ntBASIC15.33■□□□□ 0.04
Pif1Q80SX8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pif1Q80SX8 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.33■□□□□ 0.04
Pif1Q80SX8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pif1Q80SX8 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pif1Q80SX8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Pif1Q80SX8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pif1Q80SX8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pif1Q80SX8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pif1Q80SX8 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pif1Q80SX8 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pif1Q80SX8 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pif1Q80SX8 Gm6443-201ENSMUST00000203599 874 ntBASIC15.32■□□□□ 0.04
Pif1Q80SX8 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.32■□□□□ 0.04
Pif1Q80SX8 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.32■□□□□ 0.04
Pif1Q80SX8 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.32■□□□□ 0.04
Pif1Q80SX8 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pif1Q80SX8 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Pif1Q80SX8 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pif1Q80SX8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pif1Q80SX8 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pif1Q80SX8 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Pif1Q80SX8 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pif1Q80SX8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pif1Q80SX8 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Pif1Q80SX8 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Pif1Q80SX8 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pif1Q80SX8 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.31■□□□□ 0.04
Pif1Q80SX8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pif1Q80SX8 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pif1Q80SX8 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pif1Q80SX8 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.31■□□□□ 0.04
Pif1Q80SX8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pif1Q80SX8 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pif1Q80SX8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pif1Q80SX8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms