Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Casc1Q6TDU8 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Casc1Q6TDU8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Casc1Q6TDU8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Casc1Q6TDU8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Casc1Q6TDU8 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
Casc1Q6TDU8 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Casc1Q6TDU8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Casc1Q6TDU8 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Casc1Q6TDU8 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Casc1Q6TDU8 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Casc1Q6TDU8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Casc1Q6TDU8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Casc1Q6TDU8 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Casc1Q6TDU8 Gm12085-201ENSMUST00000119263 940 ntBASIC19.94■□□□□ 0.78
Casc1Q6TDU8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Casc1Q6TDU8 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.94■□□□□ 0.78
Casc1Q6TDU8 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Casc1Q6TDU8 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Casc1Q6TDU8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Casc1Q6TDU8 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Casc1Q6TDU8 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Casc1Q6TDU8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Casc1Q6TDU8 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Casc1Q6TDU8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Casc1Q6TDU8 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Casc1Q6TDU8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Casc1Q6TDU8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Casc1Q6TDU8 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Casc1Q6TDU8 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Casc1Q6TDU8 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Casc1Q6TDU8 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Casc1Q6TDU8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Casc1Q6TDU8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Casc1Q6TDU8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Casc1Q6TDU8 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Casc1Q6TDU8 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Casc1Q6TDU8 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Casc1Q6TDU8 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Casc1Q6TDU8 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Casc1Q6TDU8 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Casc1Q6TDU8 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Casc1Q6TDU8 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Casc1Q6TDU8 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Casc1Q6TDU8 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Casc1Q6TDU8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Casc1Q6TDU8 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Casc1Q6TDU8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
Casc1Q6TDU8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.92■□□□□ 0.78
Casc1Q6TDU8 Mir7071-201ENSMUST00000184847 69 ntBASIC19.92■□□□□ 0.78
Casc1Q6TDU8 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.92■□□□□ 0.78
Casc1Q6TDU8 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Casc1Q6TDU8 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Casc1Q6TDU8 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Casc1Q6TDU8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Casc1Q6TDU8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Casc1Q6TDU8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
Casc1Q6TDU8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Casc1Q6TDU8 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Casc1Q6TDU8 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Casc1Q6TDU8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Casc1Q6TDU8 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.91■□□□□ 0.78
Casc1Q6TDU8 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Casc1Q6TDU8 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Casc1Q6TDU8 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Casc1Q6TDU8 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Casc1Q6TDU8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Casc1Q6TDU8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.91■□□□□ 0.78
Casc1Q6TDU8 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Casc1Q6TDU8 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.91■□□□□ 0.78
Casc1Q6TDU8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Casc1Q6TDU8 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.91■□□□□ 0.78
Casc1Q6TDU8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.91■□□□□ 0.78
Casc1Q6TDU8 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Casc1Q6TDU8 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.91■□□□□ 0.78
Casc1Q6TDU8 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Casc1Q6TDU8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Casc1Q6TDU8 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC19.9■□□□□ 0.78
Casc1Q6TDU8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Casc1Q6TDU8 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Casc1Q6TDU8 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Casc1Q6TDU8 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Casc1Q6TDU8 Gm13216-201ENSMUST00000117145 591 ntBASIC19.9■□□□□ 0.78
Casc1Q6TDU8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Casc1Q6TDU8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.9■□□□□ 0.78
Casc1Q6TDU8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Casc1Q6TDU8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Casc1Q6TDU8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Casc1Q6TDU8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.9■□□□□ 0.78
Casc1Q6TDU8 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Casc1Q6TDU8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Casc1Q6TDU8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Casc1Q6TDU8 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Casc1Q6TDU8 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
Casc1Q6TDU8 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Casc1Q6TDU8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Casc1Q6TDU8 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Casc1Q6TDU8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Casc1Q6TDU8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.89■□□□□ 0.77
Casc1Q6TDU8 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms