Protein–RNA interactions for Protein: Q6PIJ4

Nfrkb, Nuclear factor related to kappa-B-binding protein, mousemouse

Known RBP Predictions only

Length 1,296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfrkbQ6PIJ4 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NfrkbQ6PIJ4 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NfrkbQ6PIJ4 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
NfrkbQ6PIJ4 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
NfrkbQ6PIJ4 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NfrkbQ6PIJ4 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
NfrkbQ6PIJ4 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
NfrkbQ6PIJ4 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
NfrkbQ6PIJ4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NfrkbQ6PIJ4 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NfrkbQ6PIJ4 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
NfrkbQ6PIJ4 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NfrkbQ6PIJ4 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NfrkbQ6PIJ4 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.78■□□□□ 0.6
NfrkbQ6PIJ4 Phf7-203ENSMUST00000226565 1971 ntBASIC18.78■□□□□ 0.6
NfrkbQ6PIJ4 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
NfrkbQ6PIJ4 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NfrkbQ6PIJ4 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NfrkbQ6PIJ4 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NfrkbQ6PIJ4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NfrkbQ6PIJ4 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NfrkbQ6PIJ4 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
NfrkbQ6PIJ4 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
NfrkbQ6PIJ4 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NfrkbQ6PIJ4 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NfrkbQ6PIJ4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NfrkbQ6PIJ4 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
NfrkbQ6PIJ4 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
NfrkbQ6PIJ4 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NfrkbQ6PIJ4 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NfrkbQ6PIJ4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
NfrkbQ6PIJ4 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NfrkbQ6PIJ4 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.77■□□□□ 0.6
NfrkbQ6PIJ4 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NfrkbQ6PIJ4 Mir8098-201ENSMUST00000184011 137 ntBASIC18.77■□□□□ 0.6
NfrkbQ6PIJ4 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
NfrkbQ6PIJ4 Gm43347-201ENSMUST00000200226 580 ntBASIC18.77■□□□□ 0.6
NfrkbQ6PIJ4 Gm5864-201ENSMUST00000202263 970 ntBASIC18.77■□□□□ 0.6
NfrkbQ6PIJ4 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NfrkbQ6PIJ4 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NfrkbQ6PIJ4 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
NfrkbQ6PIJ4 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NfrkbQ6PIJ4 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NfrkbQ6PIJ4 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NfrkbQ6PIJ4 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NfrkbQ6PIJ4 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
NfrkbQ6PIJ4 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
NfrkbQ6PIJ4 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NfrkbQ6PIJ4 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NfrkbQ6PIJ4 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.76■□□□□ 0.59
NfrkbQ6PIJ4 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NfrkbQ6PIJ4 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
NfrkbQ6PIJ4 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.76■□□□□ 0.59
NfrkbQ6PIJ4 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NfrkbQ6PIJ4 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
NfrkbQ6PIJ4 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NfrkbQ6PIJ4 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NfrkbQ6PIJ4 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NfrkbQ6PIJ4 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NfrkbQ6PIJ4 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NfrkbQ6PIJ4 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NfrkbQ6PIJ4 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NfrkbQ6PIJ4 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
NfrkbQ6PIJ4 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
NfrkbQ6PIJ4 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
NfrkbQ6PIJ4 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NfrkbQ6PIJ4 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NfrkbQ6PIJ4 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NfrkbQ6PIJ4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
NfrkbQ6PIJ4 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
NfrkbQ6PIJ4 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NfrkbQ6PIJ4 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NfrkbQ6PIJ4 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.75■□□□□ 0.59
NfrkbQ6PIJ4 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NfrkbQ6PIJ4 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NfrkbQ6PIJ4 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
NfrkbQ6PIJ4 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NfrkbQ6PIJ4 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NfrkbQ6PIJ4 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NfrkbQ6PIJ4 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NfrkbQ6PIJ4 Gm43514-201ENSMUST00000198852 424 ntBASIC18.75■□□□□ 0.59
NfrkbQ6PIJ4 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NfrkbQ6PIJ4 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
NfrkbQ6PIJ4 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NfrkbQ6PIJ4 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NfrkbQ6PIJ4 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NfrkbQ6PIJ4 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
NfrkbQ6PIJ4 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
NfrkbQ6PIJ4 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.74■□□□□ 0.59
NfrkbQ6PIJ4 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NfrkbQ6PIJ4 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NfrkbQ6PIJ4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NfrkbQ6PIJ4 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NfrkbQ6PIJ4 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.74■□□□□ 0.59
NfrkbQ6PIJ4 Gm13884-201ENSMUST00000118103 829 ntBASIC18.74■□□□□ 0.59
NfrkbQ6PIJ4 Gm15372-201ENSMUST00000120729 834 ntBASIC18.74■□□□□ 0.59
NfrkbQ6PIJ4 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NfrkbQ6PIJ4 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NfrkbQ6PIJ4 Gm6443-201ENSMUST00000203599 874 ntBASIC18.74■□□□□ 0.59
NfrkbQ6PIJ4 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms