Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc46a1Q6PEM8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.68□□□□□ -0.06
Slc46a1Q6PEM8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc46a1Q6PEM8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc46a1Q6PEM8 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.68□□□□□ -0.06
Slc46a1Q6PEM8 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.68□□□□□ -0.06
Slc46a1Q6PEM8 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.68□□□□□ -0.06
Slc46a1Q6PEM8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc46a1Q6PEM8 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.68□□□□□ -0.06
Slc46a1Q6PEM8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc46a1Q6PEM8 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Slc46a1Q6PEM8 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc46a1Q6PEM8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc46a1Q6PEM8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc46a1Q6PEM8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Slc46a1Q6PEM8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc46a1Q6PEM8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Slc46a1Q6PEM8 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc46a1Q6PEM8 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc46a1Q6PEM8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Slc46a1Q6PEM8 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc46a1Q6PEM8 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Slc46a1Q6PEM8 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc46a1Q6PEM8 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.67□□□□□ -0.06
Slc46a1Q6PEM8 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.67□□□□□ -0.06
Slc46a1Q6PEM8 Gm27000-201ENSMUST00000182943 842 ntBASIC14.67□□□□□ -0.06
Slc46a1Q6PEM8 Gm17807-201ENSMUST00000186869 298 ntBASIC14.67□□□□□ -0.06
Slc46a1Q6PEM8 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.67□□□□□ -0.06
Slc46a1Q6PEM8 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.67□□□□□ -0.06
Slc46a1Q6PEM8 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.67□□□□□ -0.06
Slc46a1Q6PEM8 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Slc46a1Q6PEM8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc46a1Q6PEM8 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Slc46a1Q6PEM8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc46a1Q6PEM8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Slc46a1Q6PEM8 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc46a1Q6PEM8 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc46a1Q6PEM8 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Slc46a1Q6PEM8 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Slc46a1Q6PEM8 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.66□□□□□ -0.06
Slc46a1Q6PEM8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Slc46a1Q6PEM8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Slc46a1Q6PEM8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Slc46a1Q6PEM8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Slc46a1Q6PEM8 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Slc46a1Q6PEM8 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Slc46a1Q6PEM8 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Slc46a1Q6PEM8 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Slc46a1Q6PEM8 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Slc46a1Q6PEM8 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Slc46a1Q6PEM8 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Slc46a1Q6PEM8 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Slc46a1Q6PEM8 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Slc46a1Q6PEM8 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Slc46a1Q6PEM8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Slc46a1Q6PEM8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Slc46a1Q6PEM8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Slc46a1Q6PEM8 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Slc46a1Q6PEM8 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Slc46a1Q6PEM8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Slc46a1Q6PEM8 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Slc46a1Q6PEM8 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Slc46a1Q6PEM8 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Slc46a1Q6PEM8 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.65□□□□□ -0.06
Slc46a1Q6PEM8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Slc46a1Q6PEM8 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.65□□□□□ -0.06
Slc46a1Q6PEM8 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.65□□□□□ -0.06
Slc46a1Q6PEM8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.65□□□□□ -0.06
Slc46a1Q6PEM8 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.65□□□□□ -0.06
Slc46a1Q6PEM8 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Slc46a1Q6PEM8 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Slc46a1Q6PEM8 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Slc46a1Q6PEM8 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Slc46a1Q6PEM8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Slc46a1Q6PEM8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.65□□□□□ -0.06
Slc46a1Q6PEM8 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
Slc46a1Q6PEM8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Slc46a1Q6PEM8 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Slc46a1Q6PEM8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Slc46a1Q6PEM8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Slc46a1Q6PEM8 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Slc46a1Q6PEM8 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Slc46a1Q6PEM8 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Slc46a1Q6PEM8 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Slc46a1Q6PEM8 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Slc46a1Q6PEM8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Slc46a1Q6PEM8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Slc46a1Q6PEM8 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Slc46a1Q6PEM8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Slc46a1Q6PEM8 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Slc46a1Q6PEM8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.64□□□□□ -0.07
Slc46a1Q6PEM8 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Slc46a1Q6PEM8 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Slc46a1Q6PEM8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.64□□□□□ -0.07
Slc46a1Q6PEM8 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Slc46a1Q6PEM8 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.64□□□□□ -0.07
Slc46a1Q6PEM8 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.64□□□□□ -0.07
Slc46a1Q6PEM8 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Slc46a1Q6PEM8 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Slc46a1Q6PEM8 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms