Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ShbQ6PD21 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ShbQ6PD21 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ShbQ6PD21 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
ShbQ6PD21 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
ShbQ6PD21 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ShbQ6PD21 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
ShbQ6PD21 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18■□□□□ 0.47
ShbQ6PD21 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18■□□□□ 0.47
ShbQ6PD21 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ShbQ6PD21 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
ShbQ6PD21 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC18■□□□□ 0.47
ShbQ6PD21 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18■□□□□ 0.47
ShbQ6PD21 Gm5253-201ENSMUST00000187104 1025 ntBASIC18■□□□□ 0.47
ShbQ6PD21 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
ShbQ6PD21 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ShbQ6PD21 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ShbQ6PD21 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18■□□□□ 0.47
ShbQ6PD21 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ShbQ6PD21 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ShbQ6PD21 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
ShbQ6PD21 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ShbQ6PD21 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ShbQ6PD21 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18■□□□□ 0.47
ShbQ6PD21 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
ShbQ6PD21 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ShbQ6PD21 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ShbQ6PD21 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ShbQ6PD21 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ShbQ6PD21 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ShbQ6PD21 Gm25406-201ENSMUST00000157599 105 ntBASIC17.99■□□□□ 0.47
ShbQ6PD21 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.99■□□□□ 0.47
ShbQ6PD21 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
ShbQ6PD21 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.99■□□□□ 0.47
ShbQ6PD21 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
ShbQ6PD21 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
ShbQ6PD21 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ShbQ6PD21 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ShbQ6PD21 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ShbQ6PD21 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.98■□□□□ 0.47
ShbQ6PD21 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ShbQ6PD21 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ShbQ6PD21 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.98■□□□□ 0.47
ShbQ6PD21 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ShbQ6PD21 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ShbQ6PD21 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ShbQ6PD21 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ShbQ6PD21 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ShbQ6PD21 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ShbQ6PD21 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ShbQ6PD21 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ShbQ6PD21 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.98■□□□□ 0.47
ShbQ6PD21 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ShbQ6PD21 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ShbQ6PD21 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ShbQ6PD21 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ShbQ6PD21 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ShbQ6PD21 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ShbQ6PD21 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ShbQ6PD21 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ShbQ6PD21 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ShbQ6PD21 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
ShbQ6PD21 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ShbQ6PD21 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.97■□□□□ 0.47
ShbQ6PD21 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ShbQ6PD21 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.97■□□□□ 0.47
ShbQ6PD21 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.97■□□□□ 0.47
ShbQ6PD21 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ShbQ6PD21 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ShbQ6PD21 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ShbQ6PD21 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ShbQ6PD21 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ShbQ6PD21 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ShbQ6PD21 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ShbQ6PD21 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.96■□□□□ 0.47
ShbQ6PD21 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.96■□□□□ 0.47
ShbQ6PD21 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ShbQ6PD21 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ShbQ6PD21 Gm27646-201ENSMUST00000183989 110 ntBASIC17.96■□□□□ 0.47
ShbQ6PD21 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.96■□□□□ 0.47
ShbQ6PD21 Wdyhv1-206ENSMUST00000227142 786 ntBASIC17.96■□□□□ 0.47
ShbQ6PD21 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ShbQ6PD21 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ShbQ6PD21 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
ShbQ6PD21 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
ShbQ6PD21 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.96■□□□□ 0.47
ShbQ6PD21 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.96■□□□□ 0.47
ShbQ6PD21 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ShbQ6PD21 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ShbQ6PD21 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.96■□□□□ 0.47
ShbQ6PD21 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
ShbQ6PD21 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ShbQ6PD21 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
ShbQ6PD21 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ShbQ6PD21 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
ShbQ6PD21 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.95■□□□□ 0.46
ShbQ6PD21 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.95■□□□□ 0.46
ShbQ6PD21 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ShbQ6PD21 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.95■□□□□ 0.46
ShbQ6PD21 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms