Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Kdm3aQ6PCM1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Kdm3aQ6PCM1 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Kdm3aQ6PCM1 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Kdm3aQ6PCM1 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Kdm3aQ6PCM1 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC20.08■□□□□ 0.81
Kdm3aQ6PCM1 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Kdm3aQ6PCM1 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Kdm3aQ6PCM1 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Kdm3aQ6PCM1 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Kdm3aQ6PCM1 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.08■□□□□ 0.81
Kdm3aQ6PCM1 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Kdm3aQ6PCM1 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Kdm3aQ6PCM1 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Kdm3aQ6PCM1 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Kdm3aQ6PCM1 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
Kdm3aQ6PCM1 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Kdm3aQ6PCM1 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Kdm3aQ6PCM1 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC20.08■□□□□ 0.8
Kdm3aQ6PCM1 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Kdm3aQ6PCM1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Kdm3aQ6PCM1 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC20.07■□□□□ 0.8
Kdm3aQ6PCM1 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC20.07■□□□□ 0.8
Kdm3aQ6PCM1 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.07■□□□□ 0.8
Kdm3aQ6PCM1 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Kdm3aQ6PCM1 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Kdm3aQ6PCM1 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Kdm3aQ6PCM1 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Kdm3aQ6PCM1 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Kdm3aQ6PCM1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Kdm3aQ6PCM1 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Kdm3aQ6PCM1 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Kdm3aQ6PCM1 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Kdm3aQ6PCM1 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Kdm3aQ6PCM1 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Kdm3aQ6PCM1 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Kdm3aQ6PCM1 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Kdm3aQ6PCM1 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Kdm3aQ6PCM1 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Kdm3aQ6PCM1 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC20.06■□□□□ 0.8
Kdm3aQ6PCM1 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Kdm3aQ6PCM1 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Kdm3aQ6PCM1 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Kdm3aQ6PCM1 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Kdm3aQ6PCM1 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
Kdm3aQ6PCM1 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Kdm3aQ6PCM1 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Kdm3aQ6PCM1 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Kdm3aQ6PCM1 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Kdm3aQ6PCM1 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Kdm3aQ6PCM1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Kdm3aQ6PCM1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Kdm3aQ6PCM1 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Kdm3aQ6PCM1 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kdm3aQ6PCM1 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC20.05■□□□□ 0.8
Kdm3aQ6PCM1 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC20.05■□□□□ 0.8
Kdm3aQ6PCM1 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Kdm3aQ6PCM1 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kdm3aQ6PCM1 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kdm3aQ6PCM1 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Kdm3aQ6PCM1 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.05■□□□□ 0.8
Kdm3aQ6PCM1 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kdm3aQ6PCM1 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kdm3aQ6PCM1 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kdm3aQ6PCM1 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.05■□□□□ 0.8
Kdm3aQ6PCM1 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kdm3aQ6PCM1 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC20.05■□□□□ 0.8
Kdm3aQ6PCM1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kdm3aQ6PCM1 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kdm3aQ6PCM1 Gm13312-201ENSMUST00000119631 718 ntBASIC20.04■□□□□ 0.8
Kdm3aQ6PCM1 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Kdm3aQ6PCM1 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC20.04■□□□□ 0.8
Kdm3aQ6PCM1 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Kdm3aQ6PCM1 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Kdm3aQ6PCM1 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Kdm3aQ6PCM1 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Kdm3aQ6PCM1 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Kdm3aQ6PCM1 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Kdm3aQ6PCM1 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Kdm3aQ6PCM1 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Kdm3aQ6PCM1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Kdm3aQ6PCM1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Kdm3aQ6PCM1 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Kdm3aQ6PCM1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Kdm3aQ6PCM1 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Kdm3aQ6PCM1 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Kdm3aQ6PCM1 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC20.03■□□□□ 0.8
Kdm3aQ6PCM1 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Kdm3aQ6PCM1 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Kdm3aQ6PCM1 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Kdm3aQ6PCM1 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Kdm3aQ6PCM1 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Kdm3aQ6PCM1 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.03■□□□□ 0.8
Kdm3aQ6PCM1 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Kdm3aQ6PCM1 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Kdm3aQ6PCM1 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Kdm3aQ6PCM1 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Kdm3aQ6PCM1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Kdm3aQ6PCM1 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Kdm3aQ6PCM1 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms