Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sp140Q6NSQ5 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sp140Q6NSQ5 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sp140Q6NSQ5 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sp140Q6NSQ5 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sp140Q6NSQ5 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sp140Q6NSQ5 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sp140Q6NSQ5 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sp140Q6NSQ5 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sp140Q6NSQ5 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sp140Q6NSQ5 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sp140Q6NSQ5 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sp140Q6NSQ5 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sp140Q6NSQ5 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sp140Q6NSQ5 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sp140Q6NSQ5 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Sp140Q6NSQ5 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sp140Q6NSQ5 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sp140Q6NSQ5 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sp140Q6NSQ5 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sp140Q6NSQ5 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Sp140Q6NSQ5 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.92■□□□□ 0.3
Sp140Q6NSQ5 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sp140Q6NSQ5 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sp140Q6NSQ5 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.92■□□□□ 0.3
Sp140Q6NSQ5 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sp140Q6NSQ5 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sp140Q6NSQ5 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sp140Q6NSQ5 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Sp140Q6NSQ5 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sp140Q6NSQ5 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sp140Q6NSQ5 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.92■□□□□ 0.3
Sp140Q6NSQ5 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sp140Q6NSQ5 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Sp140Q6NSQ5 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sp140Q6NSQ5 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sp140Q6NSQ5 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sp140Q6NSQ5 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sp140Q6NSQ5 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sp140Q6NSQ5 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Sp140Q6NSQ5 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sp140Q6NSQ5 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
Sp140Q6NSQ5 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sp140Q6NSQ5 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sp140Q6NSQ5 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sp140Q6NSQ5 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sp140Q6NSQ5 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sp140Q6NSQ5 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sp140Q6NSQ5 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sp140Q6NSQ5 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sp140Q6NSQ5 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sp140Q6NSQ5 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sp140Q6NSQ5 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sp140Q6NSQ5 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sp140Q6NSQ5 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.91■□□□□ 0.3
Sp140Q6NSQ5 Gm30025-201ENSMUST00000218555 728 ntBASIC16.91■□□□□ 0.3
Sp140Q6NSQ5 Gm7370-201ENSMUST00000219471 767 ntBASIC16.91■□□□□ 0.3
Sp140Q6NSQ5 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sp140Q6NSQ5 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sp140Q6NSQ5 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sp140Q6NSQ5 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sp140Q6NSQ5 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sp140Q6NSQ5 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sp140Q6NSQ5 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sp140Q6NSQ5 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sp140Q6NSQ5 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sp140Q6NSQ5 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.91■□□□□ 0.3
Sp140Q6NSQ5 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
Sp140Q6NSQ5 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.91■□□□□ 0.3
Sp140Q6NSQ5 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Sp140Q6NSQ5 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Sp140Q6NSQ5 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.9■□□□□ 0.3
Sp140Q6NSQ5 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sp140Q6NSQ5 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sp140Q6NSQ5 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sp140Q6NSQ5 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sp140Q6NSQ5 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Sp140Q6NSQ5 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sp140Q6NSQ5 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sp140Q6NSQ5 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Sp140Q6NSQ5 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sp140Q6NSQ5 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sp140Q6NSQ5 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sp140Q6NSQ5 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Sp140Q6NSQ5 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sp140Q6NSQ5 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sp140Q6NSQ5 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sp140Q6NSQ5 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sp140Q6NSQ5 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sp140Q6NSQ5 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sp140Q6NSQ5 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sp140Q6NSQ5 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Sp140Q6NSQ5 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sp140Q6NSQ5 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.89■□□□□ 0.29
Sp140Q6NSQ5 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
Sp140Q6NSQ5 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sp140Q6NSQ5 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sp140Q6NSQ5 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sp140Q6NSQ5 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sp140Q6NSQ5 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms