Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Six2Q62232 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Six2Q62232 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Six2Q62232 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Six2Q62232 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Six2Q62232 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Six2Q62232 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.77■□□□□ 0.44
Six2Q62232 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.77■□□□□ 0.44
Six2Q62232 Gm13474-201ENSMUST00000122466 815 ntBASIC17.77■□□□□ 0.44
Six2Q62232 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.77■□□□□ 0.44
Six2Q62232 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.77■□□□□ 0.44
Six2Q62232 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.77■□□□□ 0.44
Six2Q62232 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.77■□□□□ 0.44
Six2Q62232 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.77■□□□□ 0.44
Six2Q62232 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Six2Q62232 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Six2Q62232 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.77■□□□□ 0.44
Six2Q62232 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Six2Q62232 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Six2Q62232 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Six2Q62232 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Six2Q62232 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Six2Q62232 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Six2Q62232 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Six2Q62232 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.76■□□□□ 0.43
Six2Q62232 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Six2Q62232 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Six2Q62232 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
Six2Q62232 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.76■□□□□ 0.43
Six2Q62232 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Six2Q62232 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Six2Q62232 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Six2Q62232 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Six2Q62232 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Six2Q62232 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Six2Q62232 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Six2Q62232 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.76■□□□□ 0.43
Six2Q62232 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
Six2Q62232 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Six2Q62232 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Six2Q62232 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Six2Q62232 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.75■□□□□ 0.43
Six2Q62232 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six2Q62232 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Six2Q62232 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Six2Q62232 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six2Q62232 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six2Q62232 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six2Q62232 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six2Q62232 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.75■□□□□ 0.43
Six2Q62232 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.75■□□□□ 0.43
Six2Q62232 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.75■□□□□ 0.43
Six2Q62232 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
Six2Q62232 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six2Q62232 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six2Q62232 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six2Q62232 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six2Q62232 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six2Q62232 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six2Q62232 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six2Q62232 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Six2Q62232 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six2Q62232 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Six2Q62232 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Six2Q62232 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.74■□□□□ 0.43
Six2Q62232 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.74■□□□□ 0.43
Six2Q62232 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six2Q62232 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six2Q62232 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Six2Q62232 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.74■□□□□ 0.43
Six2Q62232 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.74■□□□□ 0.43
Six2Q62232 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six2Q62232 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six2Q62232 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six2Q62232 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Six2Q62232 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Six2Q62232 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Six2Q62232 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six2Q62232 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.74■□□□□ 0.43
Six2Q62232 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six2Q62232 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six2Q62232 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six2Q62232 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Six2Q62232 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six2Q62232 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Six2Q62232 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six2Q62232 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six2Q62232 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Six2Q62232 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six2Q62232 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six2Q62232 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Six2Q62232 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six2Q62232 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Six2Q62232 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Six2Q62232 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Six2Q62232 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Six2Q62232 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six2Q62232 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six2Q62232 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six2Q62232 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms