Protein–RNA interactions for Protein: Q61500

Itm2a, Integral membrane protein 2A, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itm2aQ61500 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Itm2aQ61500 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Itm2aQ61500 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.45■□□□□ 0.22
Itm2aQ61500 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Itm2aQ61500 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.45■□□□□ 0.22
Itm2aQ61500 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.45■□□□□ 0.22
Itm2aQ61500 Gm13158-201ENSMUST00000122007 736 ntBASIC16.45■□□□□ 0.22
Itm2aQ61500 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Itm2aQ61500 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Itm2aQ61500 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Itm2aQ61500 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Itm2aQ61500 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.45■□□□□ 0.22
Itm2aQ61500 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Itm2aQ61500 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Itm2aQ61500 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Itm2aQ61500 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Itm2aQ61500 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Itm2aQ61500 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Itm2aQ61500 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Itm2aQ61500 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Itm2aQ61500 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Itm2aQ61500 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Itm2aQ61500 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Itm2aQ61500 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Itm2aQ61500 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.44■□□□□ 0.22
Itm2aQ61500 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Itm2aQ61500 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Itm2aQ61500 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Itm2aQ61500 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.44■□□□□ 0.22
Itm2aQ61500 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Itm2aQ61500 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.44■□□□□ 0.22
Itm2aQ61500 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.44■□□□□ 0.22
Itm2aQ61500 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Itm2aQ61500 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Itm2aQ61500 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Itm2aQ61500 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Itm2aQ61500 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Itm2aQ61500 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Itm2aQ61500 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Itm2aQ61500 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Itm2aQ61500 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Itm2aQ61500 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Itm2aQ61500 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Itm2aQ61500 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Itm2aQ61500 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Itm2aQ61500 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Itm2aQ61500 Gm12933-201ENSMUST00000120203 872 ntBASIC16.43■□□□□ 0.22
Itm2aQ61500 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Itm2aQ61500 Gm8495-201ENSMUST00000188740 694 ntBASIC16.43■□□□□ 0.22
Itm2aQ61500 Gm37179-201ENSMUST00000194862 823 ntBASIC16.43■□□□□ 0.22
Itm2aQ61500 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.43■□□□□ 0.22
Itm2aQ61500 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Itm2aQ61500 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Itm2aQ61500 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Itm2aQ61500 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Itm2aQ61500 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Itm2aQ61500 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Itm2aQ61500 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Itm2aQ61500 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
Itm2aQ61500 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Itm2aQ61500 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Itm2aQ61500 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Itm2aQ61500 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Itm2aQ61500 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.42■□□□□ 0.22
Itm2aQ61500 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Itm2aQ61500 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Itm2aQ61500 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Itm2aQ61500 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Itm2aQ61500 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Itm2aQ61500 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Itm2aQ61500 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.42■□□□□ 0.22
Itm2aQ61500 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Itm2aQ61500 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Itm2aQ61500 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Itm2aQ61500 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Itm2aQ61500 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Itm2aQ61500 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Itm2aQ61500 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Itm2aQ61500 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Itm2aQ61500 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Itm2aQ61500 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.41■□□□□ 0.22
Itm2aQ61500 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Itm2aQ61500 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Itm2aQ61500 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.41■□□□□ 0.22
Itm2aQ61500 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Itm2aQ61500 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.41■□□□□ 0.22
Itm2aQ61500 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.41■□□□□ 0.22
Itm2aQ61500 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.41■□□□□ 0.22
Itm2aQ61500 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Itm2aQ61500 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Itm2aQ61500 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Itm2aQ61500 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Itm2aQ61500 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Itm2aQ61500 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Itm2aQ61500 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Itm2aQ61500 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Itm2aQ61500 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Itm2aQ61500 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Itm2aQ61500 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.4■□□□□ 0.22
Itm2aQ61500 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms