Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Six4Q61321 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Six4Q61321 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six4Q61321 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
Six4Q61321 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Six4Q61321 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Six4Q61321 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Six4Q61321 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six4Q61321 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six4Q61321 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Six4Q61321 Gm23634-201ENSMUST00000175071 91 ntBASIC16.83■□□□□ 0.28
Six4Q61321 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Six4Q61321 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six4Q61321 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six4Q61321 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six4Q61321 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six4Q61321 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six4Q61321 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six4Q61321 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six4Q61321 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six4Q61321 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Six4Q61321 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Six4Q61321 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six4Q61321 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six4Q61321 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six4Q61321 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Six4Q61321 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Six4Q61321 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Six4Q61321 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six4Q61321 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six4Q61321 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six4Q61321 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six4Q61321 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six4Q61321 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six4Q61321 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six4Q61321 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.82■□□□□ 0.28
Six4Q61321 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six4Q61321 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six4Q61321 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.81■□□□□ 0.28
Six4Q61321 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.81■□□□□ 0.28
Six4Q61321 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Six4Q61321 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Six4Q61321 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Six4Q61321 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Six4Q61321 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six4Q61321 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six4Q61321 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.81■□□□□ 0.28
Six4Q61321 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six4Q61321 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.81■□□□□ 0.28
Six4Q61321 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six4Q61321 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Six4Q61321 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.81■□□□□ 0.28
Six4Q61321 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six4Q61321 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six4Q61321 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Six4Q61321 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Six4Q61321 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six4Q61321 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Six4Q61321 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six4Q61321 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.8■□□□□ 0.28
Six4Q61321 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six4Q61321 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six4Q61321 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Six4Q61321 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Six4Q61321 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six4Q61321 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Six4Q61321 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six4Q61321 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six4Q61321 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six4Q61321 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Six4Q61321 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Six4Q61321 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Six4Q61321 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Six4Q61321 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six4Q61321 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six4Q61321 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six4Q61321 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Six4Q61321 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six4Q61321 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six4Q61321 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.8■□□□□ 0.28
Six4Q61321 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Six4Q61321 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Six4Q61321 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.8■□□□□ 0.28
Six4Q61321 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six4Q61321 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Six4Q61321 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six4Q61321 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six4Q61321 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six4Q61321 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six4Q61321 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six4Q61321 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.79■□□□□ 0.28
Six4Q61321 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.79■□□□□ 0.28
Six4Q61321 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Six4Q61321 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Six4Q61321 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.79■□□□□ 0.28
Six4Q61321 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.79■□□□□ 0.28
Six4Q61321 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.79■□□□□ 0.28
Six4Q61321 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Six4Q61321 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six4Q61321 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms