Protein–RNA interactions for Protein: Q61136

Prpf4b, Serine/threonine-protein kinase PRP4 homolog, mousemouse

Known RBP Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf4bQ61136 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Prpf4bQ61136 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf4bQ61136 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf4bQ61136 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
Prpf4bQ61136 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf4bQ61136 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf4bQ61136 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Prpf4bQ61136 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf4bQ61136 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf4bQ61136 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf4bQ61136 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf4bQ61136 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf4bQ61136 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Prpf4bQ61136 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf4bQ61136 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Prpf4bQ61136 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.1■□□□□ 0.65
Prpf4bQ61136 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf4bQ61136 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.1■□□□□ 0.65
Prpf4bQ61136 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf4bQ61136 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf4bQ61136 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf4bQ61136 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.1■□□□□ 0.65
Prpf4bQ61136 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Prpf4bQ61136 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Prpf4bQ61136 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf4bQ61136 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf4bQ61136 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf4bQ61136 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf4bQ61136 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf4bQ61136 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf4bQ61136 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf4bQ61136 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf4bQ61136 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Prpf4bQ61136 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.09■□□□□ 0.65
Prpf4bQ61136 Gm3375-201ENSMUST00000203929 796 ntBASIC19.09■□□□□ 0.65
Prpf4bQ61136 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Prpf4bQ61136 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf4bQ61136 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf4bQ61136 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf4bQ61136 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Prpf4bQ61136 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
Prpf4bQ61136 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Prpf4bQ61136 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Prpf4bQ61136 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
Prpf4bQ61136 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC19.08■□□□□ 0.65
Prpf4bQ61136 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Prpf4bQ61136 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf4bQ61136 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.08■□□□□ 0.64
Prpf4bQ61136 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.08■□□□□ 0.64
Prpf4bQ61136 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.08■□□□□ 0.64
Prpf4bQ61136 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.08■□□□□ 0.64
Prpf4bQ61136 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.08■□□□□ 0.64
Prpf4bQ61136 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf4bQ61136 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf4bQ61136 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf4bQ61136 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Prpf4bQ61136 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf4bQ61136 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf4bQ61136 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf4bQ61136 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf4bQ61136 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf4bQ61136 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf4bQ61136 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf4bQ61136 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf4bQ61136 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf4bQ61136 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf4bQ61136 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf4bQ61136 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf4bQ61136 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf4bQ61136 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf4bQ61136 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf4bQ61136 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.07■□□□□ 0.64
Prpf4bQ61136 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf4bQ61136 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf4bQ61136 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf4bQ61136 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf4bQ61136 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.07■□□□□ 0.64
Prpf4bQ61136 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf4bQ61136 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Prpf4bQ61136 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf4bQ61136 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.07■□□□□ 0.64
Prpf4bQ61136 Gm27000-201ENSMUST00000182943 842 ntBASIC19.07■□□□□ 0.64
Prpf4bQ61136 Gm30025-201ENSMUST00000218555 728 ntBASIC19.07■□□□□ 0.64
Prpf4bQ61136 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf4bQ61136 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf4bQ61136 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf4bQ61136 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.07■□□□□ 0.64
Prpf4bQ61136 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf4bQ61136 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
Prpf4bQ61136 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf4bQ61136 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf4bQ61136 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf4bQ61136 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
Prpf4bQ61136 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf4bQ61136 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf4bQ61136 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf4bQ61136 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf4bQ61136 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf4bQ61136 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC19.06■□□□□ 0.64
Prpf4bQ61136 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms