Protein–RNA interactions for Protein: Q5U452

Trp53rka, MCG14616, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trp53rkaQ5U452 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trp53rkaQ5U452 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.21□□□□□ -0.29
Trp53rkaQ5U452 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trp53rkaQ5U452 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Trp53rkaQ5U452 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Trp53rkaQ5U452 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trp53rkaQ5U452 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trp53rkaQ5U452 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Trp53rkaQ5U452 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trp53rkaQ5U452 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trp53rkaQ5U452 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trp53rkaQ5U452 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trp53rkaQ5U452 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trp53rkaQ5U452 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trp53rkaQ5U452 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trp53rkaQ5U452 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trp53rkaQ5U452 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trp53rkaQ5U452 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trp53rkaQ5U452 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trp53rkaQ5U452 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trp53rkaQ5U452 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trp53rkaQ5U452 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Trp53rkaQ5U452 Gm2011-201ENSMUST00000203124 1263 ntBASIC13.2□□□□□ -0.3
Trp53rkaQ5U452 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC13.2□□□□□ -0.3
Trp53rkaQ5U452 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC13.2□□□□□ -0.3
Trp53rkaQ5U452 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Trp53rkaQ5U452 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trp53rkaQ5U452 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trp53rkaQ5U452 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trp53rkaQ5U452 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trp53rkaQ5U452 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trp53rkaQ5U452 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.2□□□□□ -0.3
Trp53rkaQ5U452 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trp53rkaQ5U452 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trp53rkaQ5U452 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trp53rkaQ5U452 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.19□□□□□ -0.3
Trp53rkaQ5U452 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.19□□□□□ -0.3
Trp53rkaQ5U452 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trp53rkaQ5U452 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trp53rkaQ5U452 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trp53rkaQ5U452 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trp53rkaQ5U452 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trp53rkaQ5U452 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.19□□□□□ -0.3
Trp53rkaQ5U452 Gm14281-201ENSMUST00000121700 1294 ntBASIC13.19□□□□□ -0.3
Trp53rkaQ5U452 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trp53rkaQ5U452 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trp53rkaQ5U452 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trp53rkaQ5U452 CT030146.1-201ENSMUST00000220919 217 ntBASIC13.19□□□□□ -0.3
Trp53rkaQ5U452 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trp53rkaQ5U452 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trp53rkaQ5U452 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trp53rkaQ5U452 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trp53rkaQ5U452 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trp53rkaQ5U452 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trp53rkaQ5U452 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trp53rkaQ5U452 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trp53rkaQ5U452 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trp53rkaQ5U452 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trp53rkaQ5U452 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trp53rkaQ5U452 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trp53rkaQ5U452 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.18□□□□□ -0.3
Trp53rkaQ5U452 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Trp53rkaQ5U452 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trp53rkaQ5U452 Gm9988-201ENSMUST00000069786 435 ntBASIC13.18□□□□□ -0.3
Trp53rkaQ5U452 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trp53rkaQ5U452 Sybu-209ENSMUST00000228639 4113 ntBASIC13.18□□□□□ -0.3
Trp53rkaQ5U452 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trp53rkaQ5U452 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trp53rkaQ5U452 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trp53rkaQ5U452 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trp53rkaQ5U452 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trp53rkaQ5U452 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trp53rkaQ5U452 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trp53rkaQ5U452 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trp53rkaQ5U452 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trp53rkaQ5U452 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trp53rkaQ5U452 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.17□□□□□ -0.3
Trp53rkaQ5U452 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trp53rkaQ5U452 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trp53rkaQ5U452 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trp53rkaQ5U452 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trp53rkaQ5U452 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trp53rkaQ5U452 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trp53rkaQ5U452 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trp53rkaQ5U452 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trp53rkaQ5U452 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trp53rkaQ5U452 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trp53rkaQ5U452 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trp53rkaQ5U452 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trp53rkaQ5U452 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trp53rkaQ5U452 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC13.17□□□□□ -0.3
Trp53rkaQ5U452 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trp53rkaQ5U452 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC13.17□□□□□ -0.3
Trp53rkaQ5U452 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trp53rkaQ5U452 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trp53rkaQ5U452 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trp53rkaQ5U452 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trp53rkaQ5U452 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trp53rkaQ5U452 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trp53rkaQ5U452 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms