Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-1Q5R1I8 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-1Q5R1I8 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-1Q5R1I8 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-1Q5R1I8 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-1Q5R1I8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-1Q5R1I8 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-1Q5R1I8 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trav3-1Q5R1I8 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-1Q5R1I8 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-1Q5R1I8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-1Q5R1I8 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav3-1Q5R1I8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-1Q5R1I8 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-1Q5R1I8 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-1Q5R1I8 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-1Q5R1I8 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-1Q5R1I8 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-1Q5R1I8 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC11.35□□□□□ -0.59
Trav3-1Q5R1I8 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-1Q5R1I8 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav3-1Q5R1I8 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-1Q5R1I8 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-1Q5R1I8 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-1Q5R1I8 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav3-1Q5R1I8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav3-1Q5R1I8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav3-1Q5R1I8 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-1Q5R1I8 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav3-1Q5R1I8 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-1Q5R1I8 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-1Q5R1I8 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-1Q5R1I8 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-1Q5R1I8 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-1Q5R1I8 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-1Q5R1I8 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-1Q5R1I8 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-1Q5R1I8 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav3-1Q5R1I8 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-1Q5R1I8 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav3-1Q5R1I8 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-1Q5R1I8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-1Q5R1I8 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-1Q5R1I8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-1Q5R1I8 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-1Q5R1I8 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-1Q5R1I8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-1Q5R1I8 Gm11960-202ENSMUST00000181063 2858 ntBASIC11.34□□□□□ -0.59
Trav3-1Q5R1I8 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-1Q5R1I8 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-1Q5R1I8 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-1Q5R1I8 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-1Q5R1I8 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-1Q5R1I8 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-1Q5R1I8 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-1Q5R1I8 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Trav3-1Q5R1I8 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-1Q5R1I8 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC11.34□□□□□ -0.59
Trav3-1Q5R1I8 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav3-1Q5R1I8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav3-1Q5R1I8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-1Q5R1I8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-1Q5R1I8 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Trav3-1Q5R1I8 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trav3-1Q5R1I8 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trav3-1Q5R1I8 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-1Q5R1I8 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-1Q5R1I8 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-1Q5R1I8 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-1Q5R1I8 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav3-1Q5R1I8 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Trav3-1Q5R1I8 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trav3-1Q5R1I8 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trav3-1Q5R1I8 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav3-1Q5R1I8 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-1Q5R1I8 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-1Q5R1I8 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav3-1Q5R1I8 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav3-1Q5R1I8 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-1Q5R1I8 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-1Q5R1I8 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-1Q5R1I8 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-1Q5R1I8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav3-1Q5R1I8 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-1Q5R1I8 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-1Q5R1I8 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav3-1Q5R1I8 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-1Q5R1I8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav3-1Q5R1I8 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-1Q5R1I8 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-1Q5R1I8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav3-1Q5R1I8 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Trav3-1Q5R1I8 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-1Q5R1I8 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-1Q5R1I8 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-1Q5R1I8 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav3-1Q5R1I8 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-1Q5R1I8 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-1Q5R1I8 Gm43697-201ENSMUST00000199637 2581 ntBASIC11.32□□□□□ -0.6
Trav3-1Q5R1I8 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms