Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Gm11452-201ENSMUST00000122376 690 ntBASIC14.64□□□□□ -0.07
Trav6-2Q5R1I4 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav6-2Q5R1I4 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-2Q5R1I4 Gm6443-201ENSMUST00000203599 874 ntBASIC14.64□□□□□ -0.07
Trav6-2Q5R1I4 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-2Q5R1I4 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-2Q5R1I4 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.64□□□□□ -0.07
Trav6-2Q5R1I4 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-2Q5R1I4 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-2Q5R1I4 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-2Q5R1I4 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.64□□□□□ -0.07
Trav6-2Q5R1I4 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav6-2Q5R1I4 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-2Q5R1I4 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-2Q5R1I4 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-2Q5R1I4 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-2Q5R1I4 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-2Q5R1I4 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-2Q5R1I4 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-2Q5R1I4 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-2Q5R1I4 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-2Q5R1I4 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-2Q5R1I4 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-2Q5R1I4 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.63□□□□□ -0.07
Trav6-2Q5R1I4 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-2Q5R1I4 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav6-2Q5R1I4 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-2Q5R1I4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-2Q5R1I4 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav6-2Q5R1I4 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-2Q5R1I4 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-2Q5R1I4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.63□□□□□ -0.07
Trav6-2Q5R1I4 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav6-2Q5R1I4 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-2Q5R1I4 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-2Q5R1I4 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-2Q5R1I4 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-2Q5R1I4 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav6-2Q5R1I4 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-2Q5R1I4 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.62□□□□□ -0.07
Trav6-2Q5R1I4 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-2Q5R1I4 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav6-2Q5R1I4 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-2Q5R1I4 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav6-2Q5R1I4 Gm18195-201ENSMUST00000207604 706 ntBASIC14.62□□□□□ -0.07
Trav6-2Q5R1I4 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-2Q5R1I4 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-2Q5R1I4 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-2Q5R1I4 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-2Q5R1I4 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-2Q5R1I4 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-2Q5R1I4 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.62□□□□□ -0.07
Trav6-2Q5R1I4 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
Trav6-2Q5R1I4 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-2Q5R1I4 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.61□□□□□ -0.07
Trav6-2Q5R1I4 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Trav6-2Q5R1I4 Gm5112-201ENSMUST00000204407 2368 ntBASIC14.61□□□□□ -0.07
Trav6-2Q5R1I4 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-2Q5R1I4 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-2Q5R1I4 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-2Q5R1I4 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-2Q5R1I4 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav6-2Q5R1I4 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Trav6-2Q5R1I4 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Trav6-2Q5R1I4 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Trav6-2Q5R1I4 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-2Q5R1I4 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.61□□□□□ -0.07
Trav6-2Q5R1I4 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.61□□□□□ -0.07
Trav6-2Q5R1I4 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.61□□□□□ -0.07
Trav6-2Q5R1I4 Gm43514-201ENSMUST00000198852 424 ntBASIC14.61□□□□□ -0.07
Trav6-2Q5R1I4 Gm44430-201ENSMUST00000203376 995 ntBASIC14.61□□□□□ -0.07
Trav6-2Q5R1I4 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav6-2Q5R1I4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav6-2Q5R1I4 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-2Q5R1I4 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-2Q5R1I4 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-2Q5R1I4 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-2Q5R1I4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav6-2Q5R1I4 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav6-2Q5R1I4 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav6-2Q5R1I4 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-2Q5R1I4 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-2Q5R1I4 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-2Q5R1I4 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-2Q5R1I4 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-2Q5R1I4 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Trav6-2Q5R1I4 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-2Q5R1I4 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-2Q5R1I4 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Trav6-2Q5R1I4 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-2Q5R1I4 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-2Q5R1I4 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-2Q5R1I4 Gm18733-201ENSMUST00000173950 856 ntBASIC14.6□□□□□ -0.07
Trav6-2Q5R1I4 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav6-2Q5R1I4 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
Trav6-2Q5R1I4 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
Trav6-2Q5R1I4 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-2Q5R1I4 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-2Q5R1I4 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-2Q5R1I4 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms