Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7d-3Q5R1I1 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav7d-3Q5R1I1 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav7d-3Q5R1I1 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav7d-3Q5R1I1 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav7d-3Q5R1I1 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav7d-3Q5R1I1 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav7d-3Q5R1I1 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav7d-3Q5R1I1 Gm5643-201ENSMUST00000117081 966 ntBASIC12.28□□□□□ -0.44
Trav7d-3Q5R1I1 Gm17661-201ENSMUST00000170317 270 ntBASIC12.28□□□□□ -0.44
Trav7d-3Q5R1I1 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav7d-3Q5R1I1 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav7d-3Q5R1I1 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav7d-3Q5R1I1 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav7d-3Q5R1I1 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Trav7d-3Q5R1I1 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav7d-3Q5R1I1 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav7d-3Q5R1I1 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav7d-3Q5R1I1 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav7d-3Q5R1I1 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav7d-3Q5R1I1 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav7d-3Q5R1I1 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav7d-3Q5R1I1 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav7d-3Q5R1I1 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav7d-3Q5R1I1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav7d-3Q5R1I1 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav7d-3Q5R1I1 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav7d-3Q5R1I1 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav7d-3Q5R1I1 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav7d-3Q5R1I1 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav7d-3Q5R1I1 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.27□□□□□ -0.45
Trav7d-3Q5R1I1 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC12.27□□□□□ -0.45
Trav7d-3Q5R1I1 AC107711.5-202ENSMUST00000226429 702 ntBASIC12.27□□□□□ -0.45
Trav7d-3Q5R1I1 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav7d-3Q5R1I1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Trav7d-3Q5R1I1 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav7d-3Q5R1I1 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav7d-3Q5R1I1 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav7d-3Q5R1I1 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav7d-3Q5R1I1 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav7d-3Q5R1I1 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.27□□□□□ -0.45
Trav7d-3Q5R1I1 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav7d-3Q5R1I1 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav7d-3Q5R1I1 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav7d-3Q5R1I1 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-3Q5R1I1 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-3Q5R1I1 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-3Q5R1I1 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-3Q5R1I1 Gm45774-201ENSMUST00000211992 2665 ntBASIC12.26□□□□□ -0.45
Trav7d-3Q5R1I1 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-3Q5R1I1 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Trav7d-3Q5R1I1 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-3Q5R1I1 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav7d-3Q5R1I1 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-3Q5R1I1 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-3Q5R1I1 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-3Q5R1I1 Gm12527-201ENSMUST00000117967 564 ntBASIC12.26□□□□□ -0.45
Trav7d-3Q5R1I1 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-3Q5R1I1 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-3Q5R1I1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-3Q5R1I1 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-3Q5R1I1 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Trav7d-3Q5R1I1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-3Q5R1I1 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav7d-3Q5R1I1 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-3Q5R1I1 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Trav7d-3Q5R1I1 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav7d-3Q5R1I1 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-3Q5R1I1 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-3Q5R1I1 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav7d-3Q5R1I1 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-3Q5R1I1 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-3Q5R1I1 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-3Q5R1I1 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-3Q5R1I1 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-3Q5R1I1 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-3Q5R1I1 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-3Q5R1I1 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-3Q5R1I1 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-3Q5R1I1 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav7d-3Q5R1I1 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-3Q5R1I1 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-3Q5R1I1 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-3Q5R1I1 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-3Q5R1I1 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-3Q5R1I1 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-3Q5R1I1 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trav7d-3Q5R1I1 Gm13216-201ENSMUST00000117145 591 ntBASIC12.25□□□□□ -0.45
Trav7d-3Q5R1I1 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav7d-3Q5R1I1 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-3Q5R1I1 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-3Q5R1I1 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-3Q5R1I1 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-3Q5R1I1 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-3Q5R1I1 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-3Q5R1I1 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav7d-3Q5R1I1 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-3Q5R1I1 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-3Q5R1I1 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-3Q5R1I1 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms