Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rnf43Q5NCP0 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rnf43Q5NCP0 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.3
Rnf43Q5NCP0 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.96■□□□□ 0.3
Rnf43Q5NCP0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf43Q5NCP0 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.95■□□□□ 0.3
Rnf43Q5NCP0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf43Q5NCP0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.95■□□□□ 0.3
Rnf43Q5NCP0 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf43Q5NCP0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Rnf43Q5NCP0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf43Q5NCP0 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.95■□□□□ 0.3
Rnf43Q5NCP0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.95■□□□□ 0.3
Rnf43Q5NCP0 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf43Q5NCP0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Rnf43Q5NCP0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf43Q5NCP0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.95■□□□□ 0.3
Rnf43Q5NCP0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf43Q5NCP0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rnf43Q5NCP0 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf43Q5NCP0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf43Q5NCP0 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf43Q5NCP0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf43Q5NCP0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf43Q5NCP0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf43Q5NCP0 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.94■□□□□ 0.3
Rnf43Q5NCP0 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf43Q5NCP0 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.94■□□□□ 0.3
Rnf43Q5NCP0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf43Q5NCP0 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
Rnf43Q5NCP0 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.94■□□□□ 0.3
Rnf43Q5NCP0 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.94■□□□□ 0.3
Rnf43Q5NCP0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.94■□□□□ 0.3
Rnf43Q5NCP0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.94■□□□□ 0.3
Rnf43Q5NCP0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf43Q5NCP0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf43Q5NCP0 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.93■□□□□ 0.3
Rnf43Q5NCP0 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf43Q5NCP0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf43Q5NCP0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf43Q5NCP0 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf43Q5NCP0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf43Q5NCP0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf43Q5NCP0 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf43Q5NCP0 Gm25925-201ENSMUST00000158314 306 ntBASIC16.93■□□□□ 0.3
Rnf43Q5NCP0 Gm27525-201ENSMUST00000184465 107 ntBASIC16.93■□□□□ 0.3
Rnf43Q5NCP0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.93■□□□□ 0.3
Rnf43Q5NCP0 Gm18421-201ENSMUST00000204122 625 ntBASIC16.93■□□□□ 0.3
Rnf43Q5NCP0 Gm18206-201ENSMUST00000207027 926 ntBASIC16.93■□□□□ 0.3
Rnf43Q5NCP0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf43Q5NCP0 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Rnf43Q5NCP0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf43Q5NCP0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Rnf43Q5NCP0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf43Q5NCP0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf43Q5NCP0 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf43Q5NCP0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rnf43Q5NCP0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.92■□□□□ 0.3
Rnf43Q5NCP0 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Rnf43Q5NCP0 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf43Q5NCP0 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf43Q5NCP0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf43Q5NCP0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf43Q5NCP0 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf43Q5NCP0 Gm2651-201ENSMUST00000203560 838 ntBASIC16.92■□□□□ 0.3
Rnf43Q5NCP0 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.92■□□□□ 0.3
Rnf43Q5NCP0 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf43Q5NCP0 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.92■□□□□ 0.3
Rnf43Q5NCP0 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Rnf43Q5NCP0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Rnf43Q5NCP0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Rnf43Q5NCP0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf43Q5NCP0 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf43Q5NCP0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf43Q5NCP0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf43Q5NCP0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf43Q5NCP0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf43Q5NCP0 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf43Q5NCP0 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf43Q5NCP0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf43Q5NCP0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf43Q5NCP0 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Rnf43Q5NCP0 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.91■□□□□ 0.3
Rnf43Q5NCP0 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.91■□□□□ 0.3
Rnf43Q5NCP0 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf43Q5NCP0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf43Q5NCP0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.91■□□□□ 0.3
Rnf43Q5NCP0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf43Q5NCP0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf43Q5NCP0 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Rnf43Q5NCP0 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf43Q5NCP0 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf43Q5NCP0 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf43Q5NCP0 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf43Q5NCP0 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf43Q5NCP0 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.91■□□□□ 0.3
Rnf43Q5NCP0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf43Q5NCP0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf43Q5NCP0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Rnf43Q5NCP0 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms