Protein–RNA interactions for Protein: Q5KU39

Vps41, Vacuolar protein sorting-associated protein 41 homolog, mousemouse

Predictions only

Length 853 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps41Q5KU39 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps41Q5KU39 Gm12382-201ENSMUST00000122005 922 ntBASIC17.45■□□□□ 0.38
Vps41Q5KU39 Gm37292-201ENSMUST00000192062 758 ntBASIC17.45■□□□□ 0.38
Vps41Q5KU39 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps41Q5KU39 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Vps41Q5KU39 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps41Q5KU39 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Vps41Q5KU39 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.45■□□□□ 0.38
Vps41Q5KU39 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps41Q5KU39 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Vps41Q5KU39 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Vps41Q5KU39 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps41Q5KU39 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.45■□□□□ 0.38
Vps41Q5KU39 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps41Q5KU39 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Vps41Q5KU39 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps41Q5KU39 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps41Q5KU39 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps41Q5KU39 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
Vps41Q5KU39 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Vps41Q5KU39 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps41Q5KU39 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps41Q5KU39 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps41Q5KU39 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps41Q5KU39 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Vps41Q5KU39 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Vps41Q5KU39 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.44■□□□□ 0.38
Vps41Q5KU39 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps41Q5KU39 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Vps41Q5KU39 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps41Q5KU39 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.44■□□□□ 0.38
Vps41Q5KU39 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Vps41Q5KU39 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps41Q5KU39 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.44■□□□□ 0.38
Vps41Q5KU39 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.44■□□□□ 0.38
Vps41Q5KU39 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Vps41Q5KU39 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.44■□□□□ 0.38
Vps41Q5KU39 Gm10517-202ENSMUST00000192970 758 ntBASIC17.44■□□□□ 0.38
Vps41Q5KU39 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps41Q5KU39 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps41Q5KU39 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Vps41Q5KU39 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.44■□□□□ 0.38
Vps41Q5KU39 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps41Q5KU39 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Vps41Q5KU39 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps41Q5KU39 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps41Q5KU39 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps41Q5KU39 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vps41Q5KU39 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps41Q5KU39 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps41Q5KU39 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vps41Q5KU39 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps41Q5KU39 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vps41Q5KU39 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.43■□□□□ 0.38
Vps41Q5KU39 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps41Q5KU39 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vps41Q5KU39 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps41Q5KU39 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Vps41Q5KU39 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.43■□□□□ 0.38
Vps41Q5KU39 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Vps41Q5KU39 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.43■□□□□ 0.38
Vps41Q5KU39 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Vps41Q5KU39 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Vps41Q5KU39 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Vps41Q5KU39 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps41Q5KU39 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vps41Q5KU39 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps41Q5KU39 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps41Q5KU39 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps41Q5KU39 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps41Q5KU39 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Vps41Q5KU39 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Vps41Q5KU39 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps41Q5KU39 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps41Q5KU39 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps41Q5KU39 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
Vps41Q5KU39 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vps41Q5KU39 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vps41Q5KU39 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.42■□□□□ 0.38
Vps41Q5KU39 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vps41Q5KU39 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Vps41Q5KU39 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps41Q5KU39 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps41Q5KU39 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps41Q5KU39 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps41Q5KU39 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps41Q5KU39 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.42■□□□□ 0.38
Vps41Q5KU39 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps41Q5KU39 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Vps41Q5KU39 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps41Q5KU39 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps41Q5KU39 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Vps41Q5KU39 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Vps41Q5KU39 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps41Q5KU39 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps41Q5KU39 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps41Q5KU39 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps41Q5KU39 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Vps41Q5KU39 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps41Q5KU39 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms