Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf20Q5DTM8 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf20Q5DTM8 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf20Q5DTM8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf20Q5DTM8 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf20Q5DTM8 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.85■□□□□ 0.77
Rnf20Q5DTM8 Gm13559-201ENSMUST00000120476 863 ntBASIC19.85■□□□□ 0.77
Rnf20Q5DTM8 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf20Q5DTM8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf20Q5DTM8 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf20Q5DTM8 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Rnf20Q5DTM8 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Rnf20Q5DTM8 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf20Q5DTM8 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf20Q5DTM8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf20Q5DTM8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf20Q5DTM8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.84■□□□□ 0.77
Rnf20Q5DTM8 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Rnf20Q5DTM8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf20Q5DTM8 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf20Q5DTM8 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf20Q5DTM8 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf20Q5DTM8 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.84■□□□□ 0.77
Rnf20Q5DTM8 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.84■□□□□ 0.77
Rnf20Q5DTM8 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf20Q5DTM8 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf20Q5DTM8 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Rnf20Q5DTM8 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf20Q5DTM8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf20Q5DTM8 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.83■□□□□ 0.77
Rnf20Q5DTM8 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.83■□□□□ 0.77
Rnf20Q5DTM8 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf20Q5DTM8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf20Q5DTM8 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf20Q5DTM8 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rnf20Q5DTM8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rnf20Q5DTM8 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Rnf20Q5DTM8 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rnf20Q5DTM8 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rnf20Q5DTM8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Rnf20Q5DTM8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Rnf20Q5DTM8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rnf20Q5DTM8 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Rnf20Q5DTM8 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf20Q5DTM8 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf20Q5DTM8 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf20Q5DTM8 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.82■□□□□ 0.76
Rnf20Q5DTM8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf20Q5DTM8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Rnf20Q5DTM8 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf20Q5DTM8 Gm13186-201ENSMUST00000118031 316 ntBASIC19.82■□□□□ 0.76
Rnf20Q5DTM8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf20Q5DTM8 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.82■□□□□ 0.76
Rnf20Q5DTM8 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Rnf20Q5DTM8 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf20Q5DTM8 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Rnf20Q5DTM8 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf20Q5DTM8 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf20Q5DTM8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf20Q5DTM8 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf20Q5DTM8 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf20Q5DTM8 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf20Q5DTM8 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.81■□□□□ 0.76
Rnf20Q5DTM8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.81■□□□□ 0.76
Rnf20Q5DTM8 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf20Q5DTM8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Rnf20Q5DTM8 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf20Q5DTM8 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf20Q5DTM8 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf20Q5DTM8 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf20Q5DTM8 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf20Q5DTM8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf20Q5DTM8 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf20Q5DTM8 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf20Q5DTM8 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Rnf20Q5DTM8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf20Q5DTM8 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Rnf20Q5DTM8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf20Q5DTM8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf20Q5DTM8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Rnf20Q5DTM8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf20Q5DTM8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf20Q5DTM8 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf20Q5DTM8 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf20Q5DTM8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf20Q5DTM8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf20Q5DTM8 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf20Q5DTM8 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf20Q5DTM8 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Rnf20Q5DTM8 Gm10252-201ENSMUST00000209541 832 ntBASIC19.8■□□□□ 0.76
Rnf20Q5DTM8 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.8■□□□□ 0.76
Rnf20Q5DTM8 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf20Q5DTM8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf20Q5DTM8 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Rnf20Q5DTM8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Rnf20Q5DTM8 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Rnf20Q5DTM8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf20Q5DTM8 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf20Q5DTM8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf20Q5DTM8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms