Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Pds5bQ4VA53 Gm43767-201ENSMUST00000198933 381 ntBASIC28.97■■■□□ 2.23
Pds5bQ4VA53 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC28.97■■■□□ 2.23
Pds5bQ4VA53 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Pds5bQ4VA53 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC28.97■■■□□ 2.23
Pds5bQ4VA53 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC28.96■■■□□ 2.23
Pds5bQ4VA53 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC28.96■■■□□ 2.23
Pds5bQ4VA53 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC28.96■■■□□ 2.23
Pds5bQ4VA53 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Pds5bQ4VA53 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Pds5bQ4VA53 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Pds5bQ4VA53 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Pds5bQ4VA53 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC28.96■■■□□ 2.23
Pds5bQ4VA53 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
Pds5bQ4VA53 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC28.95■■■□□ 2.22
Pds5bQ4VA53 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC28.95■■■□□ 2.22
Pds5bQ4VA53 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Pds5bQ4VA53 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC28.95■■■□□ 2.22
Pds5bQ4VA53 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC28.95■■■□□ 2.22
Pds5bQ4VA53 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Pds5bQ4VA53 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC28.94■■■□□ 2.22
Pds5bQ4VA53 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC28.94■■■□□ 2.22
Pds5bQ4VA53 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC28.94■■■□□ 2.22
Pds5bQ4VA53 Gm18622-201ENSMUST00000219361 595 ntBASIC28.94■■■□□ 2.22
Pds5bQ4VA53 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
Pds5bQ4VA53 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Pds5bQ4VA53 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Pds5bQ4VA53 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC28.94■■■□□ 2.22
Pds5bQ4VA53 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Pds5bQ4VA53 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
Pds5bQ4VA53 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Pds5bQ4VA53 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
Pds5bQ4VA53 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC28.94■■■□□ 2.22
Pds5bQ4VA53 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Pds5bQ4VA53 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Pds5bQ4VA53 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
Pds5bQ4VA53 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Pds5bQ4VA53 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Pds5bQ4VA53 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Pds5bQ4VA53 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC28.93■■■□□ 2.22
Pds5bQ4VA53 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC28.93■■■□□ 2.22
Pds5bQ4VA53 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Pds5bQ4VA53 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Pds5bQ4VA53 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Pds5bQ4VA53 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC28.92■■■□□ 2.22
Pds5bQ4VA53 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Pds5bQ4VA53 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC28.92■■■□□ 2.22
Pds5bQ4VA53 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC28.92■■■□□ 2.22
Pds5bQ4VA53 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Pds5bQ4VA53 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC28.92■■■□□ 2.22
Pds5bQ4VA53 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Pds5bQ4VA53 Fgf17-202ENSMUST00000227123 1336 ntBASIC28.91■■■□□ 2.22
Pds5bQ4VA53 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Pds5bQ4VA53 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
Pds5bQ4VA53 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Pds5bQ4VA53 Mir6990-201ENSMUST00000183724 91 ntBASIC28.91■■■□□ 2.22
Pds5bQ4VA53 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC28.91■■■□□ 2.22
Pds5bQ4VA53 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Pds5bQ4VA53 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Pds5bQ4VA53 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Pds5bQ4VA53 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Pds5bQ4VA53 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Pds5bQ4VA53 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC28.9■■■□□ 2.22
Pds5bQ4VA53 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Pds5bQ4VA53 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Pds5bQ4VA53 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Pds5bQ4VA53 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Pds5bQ4VA53 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC28.89■■■□□ 2.22
Pds5bQ4VA53 Gm11745-201ENSMUST00000121669 448 ntBASIC28.89■■■□□ 2.22
Pds5bQ4VA53 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC28.89■■■□□ 2.22
Pds5bQ4VA53 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC28.89■■■□□ 2.22
Pds5bQ4VA53 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Pds5bQ4VA53 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Pds5bQ4VA53 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC28.89■■■□□ 2.22
Pds5bQ4VA53 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC28.89■■■□□ 2.22
Pds5bQ4VA53 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC28.89■■■□□ 2.22
Pds5bQ4VA53 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Pds5bQ4VA53 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC28.89■■■□□ 2.21
Pds5bQ4VA53 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
Pds5bQ4VA53 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC28.88■■■□□ 2.21
Pds5bQ4VA53 Gm43474-201ENSMUST00000196415 774 ntBASIC28.88■■■□□ 2.21
Pds5bQ4VA53 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Pds5bQ4VA53 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC28.88■■■□□ 2.21
Pds5bQ4VA53 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
Pds5bQ4VA53 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Pds5bQ4VA53 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC28.88■■■□□ 2.21
Pds5bQ4VA53 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
Pds5bQ4VA53 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Pds5bQ4VA53 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Pds5bQ4VA53 Slc35b2-202ENSMUST00000223987 1766 ntBASIC28.88■■■□□ 2.21
Pds5bQ4VA53 Nrn1-204ENSMUST00000224323 1779 ntBASIC28.88■■■□□ 2.21
Pds5bQ4VA53 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC28.88■■■□□ 2.21
Pds5bQ4VA53 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC28.88■■■□□ 2.21
Pds5bQ4VA53 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Pds5bQ4VA53 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Pds5bQ4VA53 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC28.87■■■□□ 2.21
Pds5bQ4VA53 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC28.87■■■□□ 2.21
Pds5bQ4VA53 AC126408.1-201ENSMUST00000225184 523 ntBASIC28.87■■■□□ 2.21
Pds5bQ4VA53 AC147366.1-201ENSMUST00000227671 852 ntBASIC28.87■■■□□ 2.21
Pds5bQ4VA53 Gm6858-201ENSMUST00000208582 1468 ntBASIC28.87■■■□□ 2.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms