Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf38aQ4FK66 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf38aQ4FK66 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf38aQ4FK66 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf38aQ4FK66 Spr-ps1-201ENSMUST00000089584 605 ntBASIC19.44■□□□□ 0.7
Prpf38aQ4FK66 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.44■□□□□ 0.7
Prpf38aQ4FK66 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf38aQ4FK66 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf38aQ4FK66 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf38aQ4FK66 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf38aQ4FK66 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf38aQ4FK66 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf38aQ4FK66 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Prpf38aQ4FK66 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.43■□□□□ 0.7
Prpf38aQ4FK66 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Prpf38aQ4FK66 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf38aQ4FK66 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.43■□□□□ 0.7
Prpf38aQ4FK66 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf38aQ4FK66 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Prpf38aQ4FK66 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf38aQ4FK66 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf38aQ4FK66 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf38aQ4FK66 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.43■□□□□ 0.7
Prpf38aQ4FK66 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf38aQ4FK66 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf38aQ4FK66 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf38aQ4FK66 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf38aQ4FK66 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf38aQ4FK66 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
Prpf38aQ4FK66 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf38aQ4FK66 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Prpf38aQ4FK66 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Prpf38aQ4FK66 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC19.42■□□□□ 0.7
Prpf38aQ4FK66 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
Prpf38aQ4FK66 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf38aQ4FK66 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf38aQ4FK66 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Prpf38aQ4FK66 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf38aQ4FK66 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf38aQ4FK66 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf38aQ4FK66 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf38aQ4FK66 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf38aQ4FK66 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Prpf38aQ4FK66 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf38aQ4FK66 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf38aQ4FK66 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Prpf38aQ4FK66 Gm12895-201ENSMUST00000122214 226 ntBASIC19.41■□□□□ 0.7
Prpf38aQ4FK66 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Prpf38aQ4FK66 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.41■□□□□ 0.7
Prpf38aQ4FK66 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.41■□□□□ 0.7
Prpf38aQ4FK66 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf38aQ4FK66 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf38aQ4FK66 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Prpf38aQ4FK66 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf38aQ4FK66 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Prpf38aQ4FK66 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf38aQ4FK66 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Prpf38aQ4FK66 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf38aQ4FK66 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf38aQ4FK66 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Prpf38aQ4FK66 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Prpf38aQ4FK66 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf38aQ4FK66 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Prpf38aQ4FK66 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf38aQ4FK66 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf38aQ4FK66 Gm10052-201ENSMUST00000168019 960 ntBASIC19.4■□□□□ 0.7
Prpf38aQ4FK66 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.4■□□□□ 0.7
Prpf38aQ4FK66 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.4■□□□□ 0.7
Prpf38aQ4FK66 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.4■□□□□ 0.7
Prpf38aQ4FK66 Gm7729-201ENSMUST00000050143 801 ntBASIC19.4■□□□□ 0.7
Prpf38aQ4FK66 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf38aQ4FK66 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Prpf38aQ4FK66 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf38aQ4FK66 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf38aQ4FK66 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.4■□□□□ 0.7
Prpf38aQ4FK66 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Prpf38aQ4FK66 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Prpf38aQ4FK66 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Prpf38aQ4FK66 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Prpf38aQ4FK66 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Prpf38aQ4FK66 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf38aQ4FK66 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf38aQ4FK66 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf38aQ4FK66 Gm24589-201ENSMUST00000116692 94 ntBASIC19.39■□□□□ 0.69
Prpf38aQ4FK66 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf38aQ4FK66 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.39■□□□□ 0.69
Prpf38aQ4FK66 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf38aQ4FK66 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf38aQ4FK66 Gm44430-201ENSMUST00000203376 995 ntBASIC19.39■□□□□ 0.69
Prpf38aQ4FK66 Gm34391-201ENSMUST00000203706 907 ntBASIC19.39■□□□□ 0.69
Prpf38aQ4FK66 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf38aQ4FK66 Birc2-201ENSMUST00000054878 378 ntBASIC19.39■□□□□ 0.69
Prpf38aQ4FK66 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.39■□□□□ 0.69
Prpf38aQ4FK66 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf38aQ4FK66 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf38aQ4FK66 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf38aQ4FK66 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf38aQ4FK66 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.39■□□□□ 0.69
Prpf38aQ4FK66 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf38aQ4FK66 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms