Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ckap2Q3V1H1 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.14■□□□□ 0.65
Ckap2Q3V1H1 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ckap2Q3V1H1 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.14■□□□□ 0.65
Ckap2Q3V1H1 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ckap2Q3V1H1 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ckap2Q3V1H1 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ckap2Q3V1H1 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ckap2Q3V1H1 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ckap2Q3V1H1 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ckap2Q3V1H1 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ckap2Q3V1H1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ckap2Q3V1H1 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.13■□□□□ 0.65
Ckap2Q3V1H1 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ckap2Q3V1H1 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ckap2Q3V1H1 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ckap2Q3V1H1 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Ckap2Q3V1H1 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ckap2Q3V1H1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ckap2Q3V1H1 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ckap2Q3V1H1 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
Ckap2Q3V1H1 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.13■□□□□ 0.65
Ckap2Q3V1H1 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Ckap2Q3V1H1 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ckap2Q3V1H1 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ckap2Q3V1H1 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ckap2Q3V1H1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ckap2Q3V1H1 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ckap2Q3V1H1 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ckap2Q3V1H1 Gm9013-201ENSMUST00000132939 882 ntBASIC19.12■□□□□ 0.65
Ckap2Q3V1H1 Gm6659-201ENSMUST00000174752 547 ntBASIC19.12■□□□□ 0.65
Ckap2Q3V1H1 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ckap2Q3V1H1 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.12■□□□□ 0.65
Ckap2Q3V1H1 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ckap2Q3V1H1 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ckap2Q3V1H1 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ckap2Q3V1H1 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Ckap2Q3V1H1 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Ckap2Q3V1H1 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ckap2Q3V1H1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ckap2Q3V1H1 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.11■□□□□ 0.65
Ckap2Q3V1H1 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ckap2Q3V1H1 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ckap2Q3V1H1 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Ckap2Q3V1H1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ckap2Q3V1H1 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ckap2Q3V1H1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ckap2Q3V1H1 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ckap2Q3V1H1 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ckap2Q3V1H1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
Ckap2Q3V1H1 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ckap2Q3V1H1 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Ckap2Q3V1H1 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ckap2Q3V1H1 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ckap2Q3V1H1 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Ckap2Q3V1H1 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ckap2Q3V1H1 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ckap2Q3V1H1 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ckap2Q3V1H1 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ckap2Q3V1H1 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.1■□□□□ 0.65
Ckap2Q3V1H1 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ckap2Q3V1H1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.1■□□□□ 0.65
Ckap2Q3V1H1 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ckap2Q3V1H1 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ckap2Q3V1H1 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.1■□□□□ 0.65
Ckap2Q3V1H1 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ckap2Q3V1H1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ckap2Q3V1H1 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ckap2Q3V1H1 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.1■□□□□ 0.65
Ckap2Q3V1H1 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ckap2Q3V1H1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Ckap2Q3V1H1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Ckap2Q3V1H1 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Ckap2Q3V1H1 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.1■□□□□ 0.65
Ckap2Q3V1H1 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ckap2Q3V1H1 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ckap2Q3V1H1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ckap2Q3V1H1 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ckap2Q3V1H1 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
Ckap2Q3V1H1 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ckap2Q3V1H1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ckap2Q3V1H1 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.09■□□□□ 0.65
Ckap2Q3V1H1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ckap2Q3V1H1 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ckap2Q3V1H1 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ckap2Q3V1H1 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.09■□□□□ 0.65
Ckap2Q3V1H1 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ckap2Q3V1H1 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.09■□□□□ 0.65
Ckap2Q3V1H1 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.09■□□□□ 0.65
Ckap2Q3V1H1 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ckap2Q3V1H1 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.09■□□□□ 0.65
Ckap2Q3V1H1 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.09■□□□□ 0.65
Ckap2Q3V1H1 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.09■□□□□ 0.65
Ckap2Q3V1H1 Gm5587-201ENSMUST00000206270 674 ntBASIC19.09■□□□□ 0.65
Ckap2Q3V1H1 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ckap2Q3V1H1 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ckap2Q3V1H1 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ckap2Q3V1H1 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ckap2Q3V1H1 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Ckap2Q3V1H1 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms