Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnrc6aQ3UHK8 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnrc6aQ3UHK8 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Tnrc6aQ3UHK8 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Tnrc6aQ3UHK8 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnrc6aQ3UHK8 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Tnrc6aQ3UHK8 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Tnrc6aQ3UHK8 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.4■□□□□ 0.06
Tnrc6aQ3UHK8 Gm18206-201ENSMUST00000207027 926 ntBASIC15.4■□□□□ 0.06
Tnrc6aQ3UHK8 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.4■□□□□ 0.06
Tnrc6aQ3UHK8 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.4■□□□□ 0.06
Tnrc6aQ3UHK8 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnrc6aQ3UHK8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnrc6aQ3UHK8 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnrc6aQ3UHK8 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Tnrc6aQ3UHK8 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnrc6aQ3UHK8 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.4■□□□□ 0.06
Tnrc6aQ3UHK8 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnrc6aQ3UHK8 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnrc6aQ3UHK8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Tnrc6aQ3UHK8 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Tnrc6aQ3UHK8 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Tnrc6aQ3UHK8 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnrc6aQ3UHK8 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnrc6aQ3UHK8 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnrc6aQ3UHK8 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Tnrc6aQ3UHK8 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Tnrc6aQ3UHK8 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Tnrc6aQ3UHK8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnrc6aQ3UHK8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnrc6aQ3UHK8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.39■□□□□ 0.05
Tnrc6aQ3UHK8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Tnrc6aQ3UHK8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnrc6aQ3UHK8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnrc6aQ3UHK8 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Tnrc6aQ3UHK8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnrc6aQ3UHK8 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Tnrc6aQ3UHK8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Tnrc6aQ3UHK8 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnrc6aQ3UHK8 Gm15165-201ENSMUST00000118140 502 ntBASIC15.39■□□□□ 0.05
Tnrc6aQ3UHK8 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.39■□□□□ 0.05
Tnrc6aQ3UHK8 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnrc6aQ3UHK8 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnrc6aQ3UHK8 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnrc6aQ3UHK8 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Tnrc6aQ3UHK8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnrc6aQ3UHK8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Tnrc6aQ3UHK8 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Tnrc6aQ3UHK8 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnrc6aQ3UHK8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tnrc6aQ3UHK8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tnrc6aQ3UHK8 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tnrc6aQ3UHK8 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.38■□□□□ 0.05
Tnrc6aQ3UHK8 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnrc6aQ3UHK8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.38■□□□□ 0.05
Tnrc6aQ3UHK8 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnrc6aQ3UHK8 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnrc6aQ3UHK8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tnrc6aQ3UHK8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tnrc6aQ3UHK8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Tnrc6aQ3UHK8 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnrc6aQ3UHK8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Tnrc6aQ3UHK8 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.38■□□□□ 0.05
Tnrc6aQ3UHK8 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
Tnrc6aQ3UHK8 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.37■□□□□ 0.05
Tnrc6aQ3UHK8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Tnrc6aQ3UHK8 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.37■□□□□ 0.05
Tnrc6aQ3UHK8 Gm18195-201ENSMUST00000207604 706 ntBASIC15.37■□□□□ 0.05
Tnrc6aQ3UHK8 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.37■□□□□ 0.05
Tnrc6aQ3UHK8 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Tnrc6aQ3UHK8 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Tnrc6aQ3UHK8 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.37■□□□□ 0.05
Tnrc6aQ3UHK8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Tnrc6aQ3UHK8 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnrc6aQ3UHK8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnrc6aQ3UHK8 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Tnrc6aQ3UHK8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnrc6aQ3UHK8 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Tnrc6aQ3UHK8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnrc6aQ3UHK8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Tnrc6aQ3UHK8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnrc6aQ3UHK8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnrc6aQ3UHK8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnrc6aQ3UHK8 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Tnrc6aQ3UHK8 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.37■□□□□ 0.05
Tnrc6aQ3UHK8 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Tnrc6aQ3UHK8 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.37■□□□□ 0.05
Tnrc6aQ3UHK8 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnrc6aQ3UHK8 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnrc6aQ3UHK8 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.37■□□□□ 0.05
Tnrc6aQ3UHK8 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnrc6aQ3UHK8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Tnrc6aQ3UHK8 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnrc6aQ3UHK8 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnrc6aQ3UHK8 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tnrc6aQ3UHK8 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tnrc6aQ3UHK8 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Tnrc6aQ3UHK8 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.36■□□□□ 0.05
Tnrc6aQ3UHK8 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tnrc6aQ3UHK8 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms