Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Brf2Q3UAW9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.71■□□□□ 0.11
Brf2Q3UAW9 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Brf2Q3UAW9 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Brf2Q3UAW9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.71■□□□□ 0.11
Brf2Q3UAW9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Brf2Q3UAW9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Brf2Q3UAW9 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Brf2Q3UAW9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Brf2Q3UAW9 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Brf2Q3UAW9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Brf2Q3UAW9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Brf2Q3UAW9 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Brf2Q3UAW9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Brf2Q3UAW9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Brf2Q3UAW9 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Brf2Q3UAW9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.71■□□□□ 0.1
Brf2Q3UAW9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Brf2Q3UAW9 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Brf2Q3UAW9 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Brf2Q3UAW9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Brf2Q3UAW9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Brf2Q3UAW9 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.7■□□□□ 0.1
Brf2Q3UAW9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Brf2Q3UAW9 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Brf2Q3UAW9 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Brf2Q3UAW9 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Brf2Q3UAW9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Brf2Q3UAW9 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Brf2Q3UAW9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Brf2Q3UAW9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.7■□□□□ 0.1
Brf2Q3UAW9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.7■□□□□ 0.1
Brf2Q3UAW9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15.7■□□□□ 0.1
Brf2Q3UAW9 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Brf2Q3UAW9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Brf2Q3UAW9 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Brf2Q3UAW9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Brf2Q3UAW9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Brf2Q3UAW9 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.7■□□□□ 0.1
Brf2Q3UAW9 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Brf2Q3UAW9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Brf2Q3UAW9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Brf2Q3UAW9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Brf2Q3UAW9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Brf2Q3UAW9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Brf2Q3UAW9 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Brf2Q3UAW9 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Brf2Q3UAW9 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Brf2Q3UAW9 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Brf2Q3UAW9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Brf2Q3UAW9 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Brf2Q3UAW9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Brf2Q3UAW9 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.69■□□□□ 0.1
Brf2Q3UAW9 Gm37055-201ENSMUST00000191866 133 ntBASIC15.69■□□□□ 0.1
Brf2Q3UAW9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.69■□□□□ 0.1
Brf2Q3UAW9 Gm30025-201ENSMUST00000218555 728 ntBASIC15.69■□□□□ 0.1
Brf2Q3UAW9 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Brf2Q3UAW9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.69■□□□□ 0.1
Brf2Q3UAW9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Brf2Q3UAW9 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Brf2Q3UAW9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Brf2Q3UAW9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Brf2Q3UAW9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Brf2Q3UAW9 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Brf2Q3UAW9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Brf2Q3UAW9 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Brf2Q3UAW9 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Brf2Q3UAW9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.68■□□□□ 0.1
Brf2Q3UAW9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Brf2Q3UAW9 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Brf2Q3UAW9 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Brf2Q3UAW9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Brf2Q3UAW9 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Brf2Q3UAW9 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Brf2Q3UAW9 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Brf2Q3UAW9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Brf2Q3UAW9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Brf2Q3UAW9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Brf2Q3UAW9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Brf2Q3UAW9 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.68■□□□□ 0.1
Brf2Q3UAW9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Brf2Q3UAW9 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Brf2Q3UAW9 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Brf2Q3UAW9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Brf2Q3UAW9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Brf2Q3UAW9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Brf2Q3UAW9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Brf2Q3UAW9 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Brf2Q3UAW9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Brf2Q3UAW9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Brf2Q3UAW9 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Brf2Q3UAW9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Brf2Q3UAW9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.67■□□□□ 0.1
Brf2Q3UAW9 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.67■□□□□ 0.1
Brf2Q3UAW9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Brf2Q3UAW9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Brf2Q3UAW9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Brf2Q3UAW9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.67■□□□□ 0.1
Brf2Q3UAW9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Brf2Q3UAW9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms