Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim63Q38HM4 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim63Q38HM4 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim63Q38HM4 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim63Q38HM4 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim63Q38HM4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim63Q38HM4 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim63Q38HM4 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trim63Q38HM4 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim63Q38HM4 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.84□□□□□ -0.19
Trim63Q38HM4 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim63Q38HM4 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trim63Q38HM4 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trim63Q38HM4 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trim63Q38HM4 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.84□□□□□ -0.19
Trim63Q38HM4 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim63Q38HM4 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim63Q38HM4 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim63Q38HM4 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim63Q38HM4 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim63Q38HM4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim63Q38HM4 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC13.84□□□□□ -0.19
Trim63Q38HM4 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim63Q38HM4 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trim63Q38HM4 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim63Q38HM4 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim63Q38HM4 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim63Q38HM4 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim63Q38HM4 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim63Q38HM4 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim63Q38HM4 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim63Q38HM4 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trim63Q38HM4 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim63Q38HM4 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim63Q38HM4 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim63Q38HM4 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
Trim63Q38HM4 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim63Q38HM4 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trim63Q38HM4 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim63Q38HM4 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trim63Q38HM4 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Trim63Q38HM4 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim63Q38HM4 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Trim63Q38HM4 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim63Q38HM4 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trim63Q38HM4 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim63Q38HM4 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim63Q38HM4 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim63Q38HM4 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
Trim63Q38HM4 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC13.83□□□□□ -0.2
Trim63Q38HM4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trim63Q38HM4 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim63Q38HM4 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim63Q38HM4 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim63Q38HM4 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Trim63Q38HM4 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim63Q38HM4 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim63Q38HM4 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim63Q38HM4 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim63Q38HM4 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim63Q38HM4 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim63Q38HM4 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim63Q38HM4 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim63Q38HM4 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim63Q38HM4 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trim63Q38HM4 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim63Q38HM4 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Trim63Q38HM4 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim63Q38HM4 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim63Q38HM4 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim63Q38HM4 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim63Q38HM4 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim63Q38HM4 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trim63Q38HM4 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim63Q38HM4 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim63Q38HM4 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim63Q38HM4 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim63Q38HM4 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.82□□□□□ -0.2
Trim63Q38HM4 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim63Q38HM4 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim63Q38HM4 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trim63Q38HM4 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim63Q38HM4 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC13.82□□□□□ -0.2
Trim63Q38HM4 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim63Q38HM4 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim63Q38HM4 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim63Q38HM4 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim63Q38HM4 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim63Q38HM4 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trim63Q38HM4 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim63Q38HM4 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.82□□□□□ -0.2
Trim63Q38HM4 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim63Q38HM4 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim63Q38HM4 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim63Q38HM4 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim63Q38HM4 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim63Q38HM4 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim63Q38HM4 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
Trim63Q38HM4 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim63Q38HM4 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms