Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcc1P97496 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcc1P97496 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcc1P97496 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcc1P97496 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcc1P97496 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcc1P97496 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcc1P97496 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcc1P97496 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Smarcc1P97496 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcc1P97496 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Smarcc1P97496 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC20.81■□□□□ 0.92
Smarcc1P97496 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.81■□□□□ 0.92
Smarcc1P97496 Gm43575-201ENSMUST00000196420 516 ntBASIC20.81■□□□□ 0.92
Smarcc1P97496 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC20.81■□□□□ 0.92
Smarcc1P97496 CT943659.1-201ENSMUST00000215459 326 ntBASIC20.81■□□□□ 0.92
Smarcc1P97496 AC127349.1-201ENSMUST00000224590 266 ntBASIC20.81■□□□□ 0.92
Smarcc1P97496 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcc1P97496 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcc1P97496 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcc1P97496 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcc1P97496 Gm15442-201ENSMUST00000117905 1527 ntBASIC20.81■□□□□ 0.92
Smarcc1P97496 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcc1P97496 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcc1P97496 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcc1P97496 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Smarcc1P97496 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcc1P97496 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcc1P97496 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcc1P97496 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcc1P97496 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcc1P97496 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcc1P97496 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Smarcc1P97496 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcc1P97496 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcc1P97496 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Smarcc1P97496 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcc1P97496 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC20.8■□□□□ 0.92
Smarcc1P97496 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Smarcc1P97496 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcc1P97496 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC20.8■□□□□ 0.92
Smarcc1P97496 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcc1P97496 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Smarcc1P97496 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcc1P97496 Gm15590-201ENSMUST00000078419 552 ntBASIC20.8■□□□□ 0.92
Smarcc1P97496 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcc1P97496 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Smarcc1P97496 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcc1P97496 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcc1P97496 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Smarcc1P97496 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcc1P97496 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcc1P97496 Gm12260-201ENSMUST00000122447 411 ntBASIC20.79■□□□□ 0.92
Smarcc1P97496 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Smarcc1P97496 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcc1P97496 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcc1P97496 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Smarcc1P97496 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcc1P97496 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcc1P97496 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcc1P97496 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Smarcc1P97496 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcc1P97496 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcc1P97496 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcc1P97496 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Smarcc1P97496 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcc1P97496 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcc1P97496 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcc1P97496 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcc1P97496 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcc1P97496 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcc1P97496 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcc1P97496 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcc1P97496 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcc1P97496 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcc1P97496 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Smarcc1P97496 Gm45203-201ENSMUST00000206384 1831 ntBASIC20.78■□□□□ 0.92
Smarcc1P97496 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcc1P97496 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smarcc1P97496 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smarcc1P97496 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.77■□□□□ 0.92
Smarcc1P97496 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Smarcc1P97496 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smarcc1P97496 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Smarcc1P97496 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC20.77■□□□□ 0.92
Smarcc1P97496 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC20.77■□□□□ 0.92
Smarcc1P97496 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC20.77■□□□□ 0.92
Smarcc1P97496 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC20.77■□□□□ 0.92
Smarcc1P97496 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smarcc1P97496 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC20.77■□□□□ 0.92
Smarcc1P97496 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smarcc1P97496 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.77■□□□□ 0.92
Smarcc1P97496 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Smarcc1P97496 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Smarcc1P97496 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Smarcc1P97496 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Smarcc1P97496 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Smarcc1P97496 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Smarcc1P97496 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.76■□□□□ 0.91
Smarcc1P97496 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms