Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.41□□□□□ -0.58
PrkdcP97313 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PrkdcP97313 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
PrkdcP97313 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PrkdcP97313 Gm15442-201ENSMUST00000117905 1527 ntBASIC11.41□□□□□ -0.58
PrkdcP97313 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PrkdcP97313 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
PrkdcP97313 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PrkdcP97313 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
PrkdcP97313 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
PrkdcP97313 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC11.41□□□□□ -0.58
PrkdcP97313 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC11.41□□□□□ -0.58
PrkdcP97313 Gm27622-201ENSMUST00000183779 60 ntBASIC11.41□□□□□ -0.58
PrkdcP97313 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC11.41□□□□□ -0.58
PrkdcP97313 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PrkdcP97313 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PrkdcP97313 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PrkdcP97313 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC11.41□□□□□ -0.58
PrkdcP97313 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
PrkdcP97313 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.41□□□□□ -0.58
PrkdcP97313 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
PrkdcP97313 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PrkdcP97313 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PrkdcP97313 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
PrkdcP97313 Gm13365-201ENSMUST00000121188 973 ntBASIC11.4□□□□□ -0.58
PrkdcP97313 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC11.4□□□□□ -0.58
PrkdcP97313 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
PrkdcP97313 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
PrkdcP97313 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PrkdcP97313 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
PrkdcP97313 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PrkdcP97313 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
PrkdcP97313 Gm2308-201ENSMUST00000166539 1004 ntBASIC11.4□□□□□ -0.58
PrkdcP97313 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC11.4□□□□□ -0.58
PrkdcP97313 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PrkdcP97313 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
PrkdcP97313 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PrkdcP97313 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PrkdcP97313 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
PrkdcP97313 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
PrkdcP97313 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
PrkdcP97313 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
PrkdcP97313 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC11.4□□□□□ -0.59
PrkdcP97313 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
PrkdcP97313 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PrkdcP97313 Fgf17-202ENSMUST00000227123 1336 ntBASIC11.39□□□□□ -0.59
PrkdcP97313 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
PrkdcP97313 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PrkdcP97313 Gm43231-201ENSMUST00000202960 2258 ntBASIC11.39□□□□□ -0.59
PrkdcP97313 Gm18889-201ENSMUST00000174284 929 ntBASIC11.39□□□□□ -0.59
PrkdcP97313 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
PrkdcP97313 AL590614.2-201ENSMUST00000225374 1937 ntBASIC11.39□□□□□ -0.59
PrkdcP97313 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PrkdcP97313 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PrkdcP97313 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PrkdcP97313 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
PrkdcP97313 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.39□□□□□ -0.59
PrkdcP97313 Gm43474-201ENSMUST00000196415 774 ntBASIC11.39□□□□□ -0.59
PrkdcP97313 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PrkdcP97313 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
PrkdcP97313 Dmtn-210ENSMUST00000228824 2377 ntBASIC11.39□□□□□ -0.59
PrkdcP97313 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
PrkdcP97313 Gfra2-202ENSMUST00000227633 1480 ntBASIC11.39□□□□□ -0.59
PrkdcP97313 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
PrkdcP97313 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
PrkdcP97313 Gm27301-201ENSMUST00000184012 127 ntBASIC11.39□□□□□ -0.59
PrkdcP97313 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
PrkdcP97313 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PrkdcP97313 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
PrkdcP97313 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
PrkdcP97313 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PrkdcP97313 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC11.39□□□□□ -0.59
PrkdcP97313 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
PrkdcP97313 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC11.38□□□□□ -0.59
PrkdcP97313 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PrkdcP97313 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.38□□□□□ -0.59
PrkdcP97313 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
PrkdcP97313 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PrkdcP97313 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PrkdcP97313 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
PrkdcP97313 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC11.38□□□□□ -0.59
PrkdcP97313 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC11.38□□□□□ -0.59
PrkdcP97313 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PrkdcP97313 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
PrkdcP97313 Gm25857-201ENSMUST00000082788 129 ntBASIC11.38□□□□□ -0.59
PrkdcP97313 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
PrkdcP97313 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC11.38□□□□□ -0.59
PrkdcP97313 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PrkdcP97313 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
PrkdcP97313 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PrkdcP97313 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PrkdcP97313 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PrkdcP97313 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
PrkdcP97313 Gm13823-201ENSMUST00000119930 345 ntBASIC11.38□□□□□ -0.59
PrkdcP97313 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PrkdcP97313 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PrkdcP97313 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
PrkdcP97313 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
PrkdcP97313 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC11.37□□□□□ -0.59
PrkdcP97313 Gm13223-201ENSMUST00000118609 747 ntBASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms