Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim43cP86449 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.13■□□□□ 0.49
Trim43cP86449 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43cP86449 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43cP86449 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.13■□□□□ 0.49
Trim43cP86449 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43cP86449 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43cP86449 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43cP86449 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43cP86449 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43cP86449 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Trim43cP86449 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trim43cP86449 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trim43cP86449 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43cP86449 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43cP86449 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43cP86449 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43cP86449 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43cP86449 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Trim43cP86449 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43cP86449 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.13■□□□□ 0.49
Trim43cP86449 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Trim43cP86449 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trim43cP86449 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.13■□□□□ 0.49
Trim43cP86449 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43cP86449 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43cP86449 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43cP86449 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43cP86449 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43cP86449 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim43cP86449 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim43cP86449 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim43cP86449 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim43cP86449 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trim43cP86449 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim43cP86449 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim43cP86449 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim43cP86449 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim43cP86449 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trim43cP86449 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim43cP86449 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim43cP86449 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.12■□□□□ 0.49
Trim43cP86449 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.12■□□□□ 0.49
Trim43cP86449 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim43cP86449 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trim43cP86449 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim43cP86449 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.12■□□□□ 0.49
Trim43cP86449 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43cP86449 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43cP86449 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.11■□□□□ 0.49
Trim43cP86449 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43cP86449 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43cP86449 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43cP86449 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43cP86449 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43cP86449 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43cP86449 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43cP86449 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.11■□□□□ 0.49
Trim43cP86449 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43cP86449 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.11■□□□□ 0.49
Trim43cP86449 Gm21559-201ENSMUST00000220638 855 ntBASIC18.11■□□□□ 0.49
Trim43cP86449 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43cP86449 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Trim43cP86449 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43cP86449 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Trim43cP86449 Gm8587-201ENSMUST00000076538 843 ntBASIC18.11■□□□□ 0.49
Trim43cP86449 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43cP86449 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43cP86449 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43cP86449 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43cP86449 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43cP86449 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43cP86449 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim43cP86449 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Trim43cP86449 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43cP86449 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trim43cP86449 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.1■□□□□ 0.49
Trim43cP86449 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43cP86449 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
Trim43cP86449 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43cP86449 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.1■□□□□ 0.49
Trim43cP86449 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43cP86449 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Trim43cP86449 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43cP86449 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43cP86449 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Trim43cP86449 Gm11336-201ENSMUST00000118168 334 ntBASIC18.1■□□□□ 0.49
Trim43cP86449 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43cP86449 Gm18421-201ENSMUST00000204122 625 ntBASIC18.1■□□□□ 0.49
Trim43cP86449 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43cP86449 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43cP86449 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43cP86449 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43cP86449 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43cP86449 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43cP86449 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.1■□□□□ 0.49
Trim43cP86449 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43cP86449 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Trim43cP86449 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43cP86449 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms