Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Six5P70178 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Six5P70178 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Six5P70178 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Six5P70178 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Six5P70178 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Six5P70178 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Six5P70178 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Six5P70178 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Six5P70178 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.61■□□□□ 0.09
Six5P70178 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.61■□□□□ 0.09
Six5P70178 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Six5P70178 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.61■□□□□ 0.09
Six5P70178 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Six5P70178 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Six5P70178 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Six5P70178 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.61■□□□□ 0.09
Six5P70178 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Six5P70178 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Six5P70178 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Six5P70178 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Six5P70178 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Six5P70178 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Six5P70178 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Six5P70178 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Six5P70178 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Six5P70178 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Six5P70178 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Six5P70178 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Six5P70178 Gm13216-201ENSMUST00000117145 591 ntBASIC15.6■□□□□ 0.09
Six5P70178 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Six5P70178 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Six5P70178 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.6■□□□□ 0.09
Six5P70178 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Six5P70178 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Six5P70178 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Six5P70178 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Six5P70178 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Six5P70178 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Six5P70178 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Six5P70178 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.6■□□□□ 0.09
Six5P70178 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Six5P70178 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Six5P70178 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Six5P70178 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Six5P70178 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Six5P70178 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Six5P70178 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Six5P70178 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Six5P70178 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Six5P70178 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Six5P70178 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Six5P70178 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.59■□□□□ 0.09
Six5P70178 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Six5P70178 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Six5P70178 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.59■□□□□ 0.09
Six5P70178 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.59■□□□□ 0.09
Six5P70178 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Six5P70178 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Six5P70178 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Six5P70178 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Six5P70178 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Six5P70178 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Six5P70178 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Six5P70178 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Six5P70178 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Six5P70178 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Six5P70178 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
Six5P70178 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Six5P70178 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Six5P70178 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Six5P70178 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Six5P70178 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.59■□□□□ 0.09
Six5P70178 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.59■□□□□ 0.09
Six5P70178 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Six5P70178 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Six5P70178 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Six5P70178 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Six5P70178 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.58■□□□□ 0.09
Six5P70178 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Six5P70178 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Six5P70178 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Six5P70178 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.58■□□□□ 0.08
Six5P70178 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Six5P70178 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.58■□□□□ 0.08
Six5P70178 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.58■□□□□ 0.08
Six5P70178 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Six5P70178 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Six5P70178 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.58■□□□□ 0.08
Six5P70178 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Six5P70178 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Six5P70178 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Six5P70178 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Six5P70178 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Six5P70178 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Six5P70178 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Six5P70178 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Six5P70178 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.57■□□□□ 0.08
Six5P70178 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Six5P70178 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms