Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tpm2P58774 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tpm2P58774 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tpm2P58774 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tpm2P58774 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Tpm2P58774 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tpm2P58774 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Tpm2P58774 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tpm2P58774 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tpm2P58774 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tpm2P58774 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.18■□□□□ 0.66
Tpm2P58774 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tpm2P58774 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Tpm2P58774 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.18■□□□□ 0.66
Tpm2P58774 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tpm2P58774 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Tpm2P58774 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tpm2P58774 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tpm2P58774 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tpm2P58774 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Tpm2P58774 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tpm2P58774 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tpm2P58774 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.18■□□□□ 0.66
Tpm2P58774 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Tpm2P58774 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tpm2P58774 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tpm2P58774 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tpm2P58774 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tpm2P58774 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tpm2P58774 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tpm2P58774 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Tpm2P58774 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tpm2P58774 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tpm2P58774 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tpm2P58774 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.17■□□□□ 0.66
Tpm2P58774 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tpm2P58774 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tpm2P58774 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tpm2P58774 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tpm2P58774 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tpm2P58774 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tpm2P58774 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tpm2P58774 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tpm2P58774 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tpm2P58774 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Tpm2P58774 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tpm2P58774 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tpm2P58774 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Tpm2P58774 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.16■□□□□ 0.66
Tpm2P58774 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tpm2P58774 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Tpm2P58774 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Tpm2P58774 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tpm2P58774 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tpm2P58774 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.16■□□□□ 0.66
Tpm2P58774 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tpm2P58774 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC19.16■□□□□ 0.66
Tpm2P58774 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Tpm2P58774 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tpm2P58774 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC19.16■□□□□ 0.66
Tpm2P58774 AC093043.3-201ENSMUST00000226531 2273 ntBASIC19.16■□□□□ 0.66
Tpm2P58774 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tpm2P58774 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm2P58774 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm2P58774 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm2P58774 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm2P58774 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm2P58774 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm2P58774 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm2P58774 Gm11927-201ENSMUST00000118472 759 ntBASIC19.15■□□□□ 0.66
Tpm2P58774 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm2P58774 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm2P58774 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm2P58774 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm2P58774 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm2P58774 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm2P58774 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm2P58774 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm2P58774 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm2P58774 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Tpm2P58774 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Tpm2P58774 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Tpm2P58774 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Tpm2P58774 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Tpm2P58774 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Tpm2P58774 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tpm2P58774 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tpm2P58774 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tpm2P58774 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tpm2P58774 Gm13148-201ENSMUST00000118892 745 ntBASIC19.14■□□□□ 0.65
Tpm2P58774 Mir2861-201ENSMUST00000175539 82 ntBASIC19.14■□□□□ 0.65
Tpm2P58774 Gm27405-201ENSMUST00000184201 112 ntBASIC19.14■□□□□ 0.65
Tpm2P58774 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.14■□□□□ 0.65
Tpm2P58774 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.14■□□□□ 0.65
Tpm2P58774 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Tpm2P58774 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.14■□□□□ 0.65
Tpm2P58774 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Tpm2P58774 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Tpm2P58774 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tpm2P58774 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms