Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Abcd3P55096 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Abcd3P55096 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Abcd3P55096 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Abcd3P55096 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.92□□□□□ -0.02
Abcd3P55096 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.92□□□□□ -0.02
Abcd3P55096 Gm7370-201ENSMUST00000219471 767 ntBASIC14.92□□□□□ -0.02
Abcd3P55096 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Abcd3P55096 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Abcd3P55096 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Abcd3P55096 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Abcd3P55096 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.92□□□□□ -0.02
Abcd3P55096 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Abcd3P55096 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Abcd3P55096 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Abcd3P55096 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Abcd3P55096 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Abcd3P55096 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Abcd3P55096 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Abcd3P55096 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Abcd3P55096 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Abcd3P55096 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Abcd3P55096 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Abcd3P55096 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Abcd3P55096 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Abcd3P55096 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Abcd3P55096 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
Abcd3P55096 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Abcd3P55096 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Abcd3P55096 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.91□□□□□ -0.02
Abcd3P55096 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Abcd3P55096 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Abcd3P55096 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Abcd3P55096 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Abcd3P55096 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Abcd3P55096 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Abcd3P55096 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Abcd3P55096 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Abcd3P55096 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Abcd3P55096 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Abcd3P55096 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Abcd3P55096 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Abcd3P55096 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Abcd3P55096 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.9□□□□□ -0.02
Abcd3P55096 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.9□□□□□ -0.02
Abcd3P55096 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.9□□□□□ -0.02
Abcd3P55096 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Abcd3P55096 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Abcd3P55096 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Abcd3P55096 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Abcd3P55096 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.9□□□□□ -0.02
Abcd3P55096 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.9□□□□□ -0.02
Abcd3P55096 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.9□□□□□ -0.02
Abcd3P55096 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.9□□□□□ -0.02
Abcd3P55096 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.9□□□□□ -0.02
Abcd3P55096 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Abcd3P55096 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Abcd3P55096 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Abcd3P55096 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Abcd3P55096 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Abcd3P55096 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Abcd3P55096 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Abcd3P55096 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Abcd3P55096 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Abcd3P55096 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Abcd3P55096 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Abcd3P55096 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Abcd3P55096 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Abcd3P55096 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Abcd3P55096 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Abcd3P55096 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Abcd3P55096 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Abcd3P55096 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Abcd3P55096 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Abcd3P55096 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Abcd3P55096 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Abcd3P55096 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Abcd3P55096 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.89□□□□□ -0.03
Abcd3P55096 Gm13186-201ENSMUST00000118031 316 ntBASIC14.89□□□□□ -0.03
Abcd3P55096 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.89□□□□□ -0.03
Abcd3P55096 Gm11539-201ENSMUST00000119837 557 ntBASIC14.89□□□□□ -0.03
Abcd3P55096 Gm13436-201ENSMUST00000120418 567 ntBASIC14.89□□□□□ -0.03
Abcd3P55096 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Abcd3P55096 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Abcd3P55096 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Abcd3P55096 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Abcd3P55096 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Abcd3P55096 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Abcd3P55096 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Abcd3P55096 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Abcd3P55096 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Abcd3P55096 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Abcd3P55096 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Abcd3P55096 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Abcd3P55096 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Abcd3P55096 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Abcd3P55096 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Abcd3P55096 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.89□□□□□ -0.03
Abcd3P55096 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Abcd3P55096 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms