Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.59■□□□□ 0.41
NcanP55066 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.59■□□□□ 0.41
NcanP55066 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NcanP55066 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NcanP55066 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NcanP55066 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
NcanP55066 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
NcanP55066 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NcanP55066 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NcanP55066 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NcanP55066 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NcanP55066 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NcanP55066 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC17.58■□□□□ 0.4
NcanP55066 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.58■□□□□ 0.4
NcanP55066 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
NcanP55066 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NcanP55066 Gm23547-201ENSMUST00000158210 271 ntBASIC17.58■□□□□ 0.4
NcanP55066 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NcanP55066 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NcanP55066 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.58■□□□□ 0.4
NcanP55066 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.58■□□□□ 0.4
NcanP55066 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
NcanP55066 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
NcanP55066 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NcanP55066 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.58■□□□□ 0.4
NcanP55066 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NcanP55066 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NcanP55066 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
NcanP55066 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
NcanP55066 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
NcanP55066 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NcanP55066 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
NcanP55066 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
NcanP55066 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
NcanP55066 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.57■□□□□ 0.4
NcanP55066 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.57■□□□□ 0.4
NcanP55066 Gm7222-201ENSMUST00000117512 906 ntBASIC17.57■□□□□ 0.4
NcanP55066 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NcanP55066 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NcanP55066 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
NcanP55066 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NcanP55066 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NcanP55066 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NcanP55066 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NcanP55066 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
NcanP55066 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.56■□□□□ 0.4
NcanP55066 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.56■□□□□ 0.4
NcanP55066 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NcanP55066 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.56■□□□□ 0.4
NcanP55066 Mir8117-201ENSMUST00000184773 107 ntBASIC17.56■□□□□ 0.4
NcanP55066 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.56■□□□□ 0.4
NcanP55066 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.56■□□□□ 0.4
NcanP55066 Gm8396-201ENSMUST00000057361 823 ntBASIC17.56■□□□□ 0.4
NcanP55066 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NcanP55066 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NcanP55066 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NcanP55066 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NcanP55066 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.56■□□□□ 0.4
NcanP55066 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NcanP55066 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NcanP55066 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
NcanP55066 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NcanP55066 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.55■□□□□ 0.4
NcanP55066 Gm12497-201ENSMUST00000138778 237 ntBASIC17.55■□□□□ 0.4
NcanP55066 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.55■□□□□ 0.4
NcanP55066 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NcanP55066 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17.55■□□□□ 0.4
NcanP55066 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.55■□□□□ 0.4
NcanP55066 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.55■□□□□ 0.4
NcanP55066 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
NcanP55066 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NcanP55066 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NcanP55066 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NcanP55066 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NcanP55066 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.55■□□□□ 0.4
NcanP55066 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
NcanP55066 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NcanP55066 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NcanP55066 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NcanP55066 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NcanP55066 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NcanP55066 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.54■□□□□ 0.4
NcanP55066 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NcanP55066 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.54■□□□□ 0.4
NcanP55066 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.54■□□□□ 0.4
NcanP55066 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NcanP55066 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.53■□□□□ 0.4
NcanP55066 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NcanP55066 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NcanP55066 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NcanP55066 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NcanP55066 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NcanP55066 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NcanP55066 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.53■□□□□ 0.4
NcanP55066 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.53■□□□□ 0.4
NcanP55066 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NcanP55066 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.53■□□□□ 0.4
NcanP55066 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
NcanP55066 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.53■□□□□ 0.4
NcanP55066 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms