Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pdx1P52946 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdx1P52946 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdx1P52946 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pdx1P52946 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdx1P52946 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pdx1P52946 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdx1P52946 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdx1P52946 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdx1P52946 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pdx1P52946 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Pdx1P52946 Gm18101-201ENSMUST00000215769 548 ntBASIC16.5■□□□□ 0.23
Pdx1P52946 Gm21559-201ENSMUST00000220638 855 ntBASIC16.5■□□□□ 0.23
Pdx1P52946 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdx1P52946 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdx1P52946 Gm8587-201ENSMUST00000076538 843 ntBASIC16.5■□□□□ 0.23
Pdx1P52946 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdx1P52946 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdx1P52946 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdx1P52946 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdx1P52946 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Pdx1P52946 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdx1P52946 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pdx1P52946 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.49■□□□□ 0.23
Pdx1P52946 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdx1P52946 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pdx1P52946 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdx1P52946 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Pdx1P52946 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdx1P52946 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.49■□□□□ 0.23
Pdx1P52946 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pdx1P52946 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdx1P52946 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdx1P52946 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.49■□□□□ 0.23
Pdx1P52946 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Pdx1P52946 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdx1P52946 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdx1P52946 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pdx1P52946 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdx1P52946 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pdx1P52946 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdx1P52946 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdx1P52946 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdx1P52946 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdx1P52946 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.49■□□□□ 0.23
Pdx1P52946 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdx1P52946 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdx1P52946 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdx1P52946 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdx1P52946 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.48■□□□□ 0.23
Pdx1P52946 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pdx1P52946 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdx1P52946 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdx1P52946 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Pdx1P52946 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdx1P52946 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdx1P52946 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pdx1P52946 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdx1P52946 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Pdx1P52946 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdx1P52946 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Pdx1P52946 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Pdx1P52946 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdx1P52946 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.48■□□□□ 0.23
Pdx1P52946 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.48■□□□□ 0.23
Pdx1P52946 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdx1P52946 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdx1P52946 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdx1P52946 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pdx1P52946 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdx1P52946 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.48■□□□□ 0.23
Pdx1P52946 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pdx1P52946 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pdx1P52946 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdx1P52946 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdx1P52946 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdx1P52946 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pdx1P52946 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Pdx1P52946 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Pdx1P52946 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdx1P52946 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Pdx1P52946 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.47■□□□□ 0.23
Pdx1P52946 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdx1P52946 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.47■□□□□ 0.23
Pdx1P52946 Gm27389-201ENSMUST00000183622 195 ntBASIC16.47■□□□□ 0.23
Pdx1P52946 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.47■□□□□ 0.23
Pdx1P52946 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Pdx1P52946 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdx1P52946 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdx1P52946 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdx1P52946 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Pdx1P52946 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdx1P52946 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Pdx1P52946 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdx1P52946 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdx1P52946 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.47■□□□□ 0.23
Pdx1P52946 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdx1P52946 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pdx1P52946 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pdx1P52946 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms