Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hnf4aP49698 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Hnf4aP49698 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hnf4aP49698 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.15■□□□□ 0.18
Hnf4aP49698 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hnf4aP49698 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hnf4aP49698 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hnf4aP49698 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hnf4aP49698 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hnf4aP49698 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.15■□□□□ 0.18
Hnf4aP49698 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hnf4aP49698 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hnf4aP49698 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hnf4aP49698 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Hnf4aP49698 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hnf4aP49698 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.15■□□□□ 0.18
Hnf4aP49698 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hnf4aP49698 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Hnf4aP49698 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.15■□□□□ 0.18
Hnf4aP49698 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hnf4aP49698 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Hnf4aP49698 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Hnf4aP49698 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.15■□□□□ 0.18
Hnf4aP49698 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hnf4aP49698 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hnf4aP49698 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hnf4aP49698 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Hnf4aP49698 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hnf4aP49698 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hnf4aP49698 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hnf4aP49698 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Hnf4aP49698 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hnf4aP49698 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hnf4aP49698 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hnf4aP49698 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hnf4aP49698 Haglr-201ENSMUST00000100000 2085 ntBASIC16.14■□□□□ 0.17
Hnf4aP49698 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hnf4aP49698 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Hnf4aP49698 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hnf4aP49698 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hnf4aP49698 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.14■□□□□ 0.17
Hnf4aP49698 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hnf4aP49698 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.14■□□□□ 0.17
Hnf4aP49698 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.14■□□□□ 0.17
Hnf4aP49698 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hnf4aP49698 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hnf4aP49698 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Hnf4aP49698 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hnf4aP49698 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.14■□□□□ 0.17
Hnf4aP49698 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hnf4aP49698 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hnf4aP49698 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hnf4aP49698 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Hnf4aP49698 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Hnf4aP49698 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hnf4aP49698 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hnf4aP49698 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hnf4aP49698 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hnf4aP49698 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hnf4aP49698 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hnf4aP49698 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hnf4aP49698 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hnf4aP49698 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hnf4aP49698 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hnf4aP49698 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hnf4aP49698 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hnf4aP49698 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hnf4aP49698 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.13■□□□□ 0.17
Hnf4aP49698 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hnf4aP49698 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hnf4aP49698 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hnf4aP49698 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Hnf4aP49698 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hnf4aP49698 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.13■□□□□ 0.17
Hnf4aP49698 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hnf4aP49698 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Hnf4aP49698 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hnf4aP49698 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Hnf4aP49698 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.12■□□□□ 0.17
Hnf4aP49698 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hnf4aP49698 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hnf4aP49698 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hnf4aP49698 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hnf4aP49698 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.12■□□□□ 0.17
Hnf4aP49698 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hnf4aP49698 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.12■□□□□ 0.17
Hnf4aP49698 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.12■□□□□ 0.17
Hnf4aP49698 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hnf4aP49698 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hnf4aP49698 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.12■□□□□ 0.17
Hnf4aP49698 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hnf4aP49698 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.12■□□□□ 0.17
Hnf4aP49698 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.12■□□□□ 0.17
Hnf4aP49698 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hnf4aP49698 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hnf4aP49698 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Hnf4aP49698 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hnf4aP49698 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hnf4aP49698 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Hnf4aP49698 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms