Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ercc3P49135 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ercc3P49135 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ercc3P49135 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ercc3P49135 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ercc3P49135 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ercc3P49135 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.78■□□□□ 0.76
Ercc3P49135 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ercc3P49135 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Ercc3P49135 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Ercc3P49135 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ercc3P49135 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ercc3P49135 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ercc3P49135 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ercc3P49135 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ercc3P49135 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.77■□□□□ 0.76
Ercc3P49135 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Ercc3P49135 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ercc3P49135 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.77■□□□□ 0.76
Ercc3P49135 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ercc3P49135 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ercc3P49135 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.77■□□□□ 0.76
Ercc3P49135 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ercc3P49135 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ercc3P49135 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ercc3P49135 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ercc3P49135 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ercc3P49135 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ercc3P49135 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.77■□□□□ 0.75
Ercc3P49135 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ercc3P49135 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.77■□□□□ 0.75
Ercc3P49135 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ercc3P49135 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ercc3P49135 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ercc3P49135 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ercc3P49135 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Ercc3P49135 Gm13186-201ENSMUST00000118031 316 ntBASIC19.76■□□□□ 0.75
Ercc3P49135 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ercc3P49135 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ercc3P49135 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ercc3P49135 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Ercc3P49135 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ercc3P49135 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Ercc3P49135 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ercc3P49135 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Ercc3P49135 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ercc3P49135 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ercc3P49135 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ercc3P49135 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ercc3P49135 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ercc3P49135 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ercc3P49135 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ercc3P49135 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ercc3P49135 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ercc3P49135 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ercc3P49135 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ercc3P49135 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ercc3P49135 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.75■□□□□ 0.75
Ercc3P49135 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ercc3P49135 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.75■□□□□ 0.75
Ercc3P49135 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.75■□□□□ 0.75
Ercc3P49135 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.75■□□□□ 0.75
Ercc3P49135 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ercc3P49135 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ercc3P49135 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ercc3P49135 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ercc3P49135 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ercc3P49135 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.75■□□□□ 0.75
Ercc3P49135 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
Ercc3P49135 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ercc3P49135 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ercc3P49135 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ercc3P49135 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Ercc3P49135 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Ercc3P49135 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.75■□□□□ 0.75
Ercc3P49135 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ercc3P49135 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ercc3P49135 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.74■□□□□ 0.75
Ercc3P49135 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.74■□□□□ 0.75
Ercc3P49135 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ercc3P49135 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Ercc3P49135 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ercc3P49135 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ercc3P49135 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ercc3P49135 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ercc3P49135 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.74■□□□□ 0.75
Ercc3P49135 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Ercc3P49135 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ercc3P49135 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ercc3P49135 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Ercc3P49135 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ercc3P49135 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ercc3P49135 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ercc3P49135 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.73■□□□□ 0.75
Ercc3P49135 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ercc3P49135 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ercc3P49135 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ercc3P49135 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ercc3P49135 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ercc3P49135 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms