Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.23■□□□□ 0.51
Sox5P35710 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sox5P35710 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.23■□□□□ 0.51
Sox5P35710 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sox5P35710 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Sox5P35710 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sox5P35710 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sox5P35710 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sox5P35710 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Sox5P35710 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sox5P35710 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.22■□□□□ 0.51
Sox5P35710 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sox5P35710 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sox5P35710 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Sox5P35710 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sox5P35710 Gm38027-201ENSMUST00000192315 235 ntBASIC18.22■□□□□ 0.51
Sox5P35710 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.22■□□□□ 0.51
Sox5P35710 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.22■□□□□ 0.51
Sox5P35710 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sox5P35710 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sox5P35710 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sox5P35710 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sox5P35710 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Sox5P35710 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sox5P35710 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sox5P35710 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.22■□□□□ 0.51
Sox5P35710 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sox5P35710 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sox5P35710 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sox5P35710 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sox5P35710 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sox5P35710 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sox5P35710 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sox5P35710 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sox5P35710 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Sox5P35710 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sox5P35710 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sox5P35710 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Sox5P35710 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sox5P35710 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sox5P35710 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sox5P35710 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.21■□□□□ 0.51
Sox5P35710 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sox5P35710 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sox5P35710 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sox5P35710 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sox5P35710 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.2■□□□□ 0.5
Sox5P35710 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sox5P35710 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sox5P35710 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sox5P35710 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Sox5P35710 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Sox5P35710 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sox5P35710 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sox5P35710 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sox5P35710 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Sox5P35710 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sox5P35710 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.2■□□□□ 0.5
Sox5P35710 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sox5P35710 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Sox5P35710 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sox5P35710 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sox5P35710 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sox5P35710 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Sox5P35710 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Sox5P35710 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sox5P35710 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sox5P35710 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sox5P35710 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Sox5P35710 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sox5P35710 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.19■□□□□ 0.5
Sox5P35710 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sox5P35710 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sox5P35710 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.19■□□□□ 0.5
Sox5P35710 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sox5P35710 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.19■□□□□ 0.5
Sox5P35710 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Sox5P35710 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Sox5P35710 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sox5P35710 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox5P35710 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox5P35710 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox5P35710 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Sox5P35710 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Sox5P35710 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox5P35710 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Sox5P35710 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sox5P35710 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox5P35710 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.18■□□□□ 0.5
Sox5P35710 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox5P35710 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.18■□□□□ 0.5
Sox5P35710 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox5P35710 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox5P35710 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sox5P35710 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox5P35710 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox5P35710 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox5P35710 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox5P35710 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Sox5P35710 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms