Protein–RNA interactions for Protein: P35583

Foxa2, Hepatocyte nuclear factor 3-beta, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa2P35583 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxa2P35583 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxa2P35583 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Foxa2P35583 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Foxa2P35583 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxa2P35583 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxa2P35583 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxa2P35583 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxa2P35583 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxa2P35583 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxa2P35583 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxa2P35583 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Foxa2P35583 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Foxa2P35583 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Foxa2P35583 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Foxa2P35583 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Foxa2P35583 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Foxa2P35583 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Foxa2P35583 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Foxa2P35583 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Foxa2P35583 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Foxa2P35583 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Foxa2P35583 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Foxa2P35583 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Foxa2P35583 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Foxa2P35583 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Foxa2P35583 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Foxa2P35583 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.02□□□□□ -0.16
Foxa2P35583 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Foxa2P35583 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.02□□□□□ -0.17
Foxa2P35583 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.02□□□□□ -0.17
Foxa2P35583 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.02□□□□□ -0.17
Foxa2P35583 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Foxa2P35583 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Foxa2P35583 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Foxa2P35583 Gm10812-201ENSMUST00000099864 546 ntBASIC14.02□□□□□ -0.17
Foxa2P35583 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Foxa2P35583 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Foxa2P35583 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Foxa2P35583 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Foxa2P35583 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Foxa2P35583 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa2P35583 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa2P35583 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa2P35583 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa2P35583 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa2P35583 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Foxa2P35583 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Foxa2P35583 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa2P35583 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa2P35583 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa2P35583 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Foxa2P35583 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa2P35583 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa2P35583 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa2P35583 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa2P35583 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa2P35583 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.01□□□□□ -0.17
Foxa2P35583 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.01□□□□□ -0.17
Foxa2P35583 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa2P35583 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa2P35583 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Foxa2P35583 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa2P35583 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa2P35583 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa2P35583 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa2P35583 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa2P35583 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Foxa2P35583 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa2P35583 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa2P35583 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa2P35583 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
Foxa2P35583 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa2P35583 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa2P35583 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14□□□□□ -0.17
Foxa2P35583 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14□□□□□ -0.17
Foxa2P35583 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Foxa2P35583 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Foxa2P35583 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Foxa2P35583 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Foxa2P35583 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14□□□□□ -0.17
Foxa2P35583 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Foxa2P35583 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Foxa2P35583 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Foxa2P35583 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14□□□□□ -0.17
Foxa2P35583 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14□□□□□ -0.17
Foxa2P35583 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14□□□□□ -0.17
Foxa2P35583 Arhgef33-211ENSMUST00000225658 473 ntBASIC14□□□□□ -0.17
Foxa2P35583 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Foxa2P35583 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14□□□□□ -0.17
Foxa2P35583 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Foxa2P35583 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Foxa2P35583 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Foxa2P35583 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14□□□□□ -0.17
Foxa2P35583 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14□□□□□ -0.17
Foxa2P35583 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Foxa2P35583 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Foxa2P35583 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Foxa2P35583 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Foxa2P35583 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms