Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Foxa1P35582 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Foxa1P35582 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Foxa1P35582 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Foxa1P35582 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Foxa1P35582 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Foxa1P35582 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Foxa1P35582 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Foxa1P35582 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Foxa1P35582 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Foxa1P35582 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Foxa1P35582 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Foxa1P35582 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Foxa1P35582 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Foxa1P35582 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Foxa1P35582 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Foxa1P35582 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Foxa1P35582 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Foxa1P35582 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Foxa1P35582 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.42■□□□□ 0.06
Foxa1P35582 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Foxa1P35582 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.42■□□□□ 0.06
Foxa1P35582 Gm21559-201ENSMUST00000220638 855 ntBASIC15.42■□□□□ 0.06
Foxa1P35582 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Foxa1P35582 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Foxa1P35582 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Foxa1P35582 Gm8587-201ENSMUST00000076538 843 ntBASIC15.42■□□□□ 0.06
Foxa1P35582 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Foxa1P35582 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Foxa1P35582 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Foxa1P35582 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Foxa1P35582 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Foxa1P35582 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Foxa1P35582 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Foxa1P35582 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Foxa1P35582 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.41■□□□□ 0.06
Foxa1P35582 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Foxa1P35582 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Foxa1P35582 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Foxa1P35582 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Foxa1P35582 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Foxa1P35582 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.41■□□□□ 0.06
Foxa1P35582 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Foxa1P35582 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Foxa1P35582 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Foxa1P35582 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Foxa1P35582 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Foxa1P35582 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Foxa1P35582 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Foxa1P35582 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Foxa1P35582 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Foxa1P35582 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Foxa1P35582 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.41■□□□□ 0.06
Foxa1P35582 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Foxa1P35582 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Foxa1P35582 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Foxa1P35582 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Foxa1P35582 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Foxa1P35582 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Foxa1P35582 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Foxa1P35582 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Foxa1P35582 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Foxa1P35582 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.41■□□□□ 0.06
Foxa1P35582 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Foxa1P35582 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Foxa1P35582 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Foxa1P35582 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Foxa1P35582 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Foxa1P35582 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Foxa1P35582 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.4■□□□□ 0.06
Foxa1P35582 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Foxa1P35582 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Foxa1P35582 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Foxa1P35582 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Foxa1P35582 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Foxa1P35582 Gm10013-201ENSMUST00000106074 672 ntBASIC15.4■□□□□ 0.06
Foxa1P35582 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Foxa1P35582 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Foxa1P35582 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Foxa1P35582 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Foxa1P35582 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.4■□□□□ 0.06
Foxa1P35582 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Foxa1P35582 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.4■□□□□ 0.06
Foxa1P35582 Gm18115-201ENSMUST00000221209 621 ntBASIC15.4■□□□□ 0.06
Foxa1P35582 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Foxa1P35582 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Foxa1P35582 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Foxa1P35582 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Foxa1P35582 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Foxa1P35582 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Foxa1P35582 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Foxa1P35582 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Foxa1P35582 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Foxa1P35582 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Foxa1P35582 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Foxa1P35582 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Foxa1P35582 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Foxa1P35582 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Foxa1P35582 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Foxa1P35582 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms