Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Cd40P27512 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cd40P27512 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cd40P27512 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cd40P27512 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cd40P27512 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cd40P27512 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Cd40P27512 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cd40P27512 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cd40P27512 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cd40P27512 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Cd40P27512 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.1■□□□□ 0.01
Cd40P27512 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd40P27512 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd40P27512 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd40P27512 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd40P27512 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cd40P27512 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd40P27512 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cd40P27512 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cd40P27512 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.09■□□□□ 0.01
Cd40P27512 Gm13836-201ENSMUST00000121159 501 ntBASIC15.09■□□□□ 0.01
Cd40P27512 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd40P27512 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Cd40P27512 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
Cd40P27512 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Cd40P27512 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd40P27512 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Cd40P27512 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.09■□□□□ 0.01
Cd40P27512 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd40P27512 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd40P27512 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd40P27512 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd40P27512 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Cd40P27512 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd40P27512 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Cd40P27512 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.09■□□□□ 0.01
Cd40P27512 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd40P27512 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.09■□□□□ 0.01
Cd40P27512 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Cd40P27512 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Cd40P27512 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Cd40P27512 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cd40P27512 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cd40P27512 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cd40P27512 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cd40P27512 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cd40P27512 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cd40P27512 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.08■□□□□ 0
Cd40P27512 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cd40P27512 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cd40P27512 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.08■□□□□ 0
Cd40P27512 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Cd40P27512 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Cd40P27512 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Cd40P27512 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Cd40P27512 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Cd40P27512 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Cd40P27512 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cd40P27512 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cd40P27512 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cd40P27512 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cd40P27512 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Cd40P27512 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cd40P27512 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cd40P27512 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.07■□□□□ 0
Cd40P27512 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Cd40P27512 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Cd40P27512 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cd40P27512 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Cd40P27512 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Cd40P27512 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Cd40P27512 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.07■□□□□ 0
Cd40P27512 Gm11355-201ENSMUST00000121120 306 ntBASIC15.07■□□□□ 0
Cd40P27512 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cd40P27512 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.07■□□□□ 0
Cd40P27512 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cd40P27512 Gm18421-201ENSMUST00000204122 625 ntBASIC15.07■□□□□ 0
Cd40P27512 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cd40P27512 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cd40P27512 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cd40P27512 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.07■□□□□ 0
Cd40P27512 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cd40P27512 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cd40P27512 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Cd40P27512 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cd40P27512 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cd40P27512 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.07■□□□□ 0
Cd40P27512 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Cd40P27512 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cd40P27512 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cd40P27512 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cd40P27512 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cd40P27512 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Cd40P27512 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Cd40P27512 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Cd40P27512 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cd40P27512 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Cd40P27512 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Cd40P27512 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms