Protein–RNA interactions for Protein: P20664

Prim1, DNA primase small subunit, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prim1P20664 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Prim1P20664 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prim1P20664 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prim1P20664 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prim1P20664 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Prim1P20664 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prim1P20664 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prim1P20664 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Prim1P20664 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Prim1P20664 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC21.15■□□□□ 0.98
Prim1P20664 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC21.15■□□□□ 0.98
Prim1P20664 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Prim1P20664 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prim1P20664 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Prim1P20664 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prim1P20664 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Prim1P20664 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Prim1P20664 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Prim1P20664 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC21.14■□□□□ 0.98
Prim1P20664 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Prim1P20664 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Prim1P20664 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Prim1P20664 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC21.14■□□□□ 0.97
Prim1P20664 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC21.14■□□□□ 0.97
Prim1P20664 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC21.14■□□□□ 0.97
Prim1P20664 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC21.14■□□□□ 0.97
Prim1P20664 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Prim1P20664 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Prim1P20664 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Prim1P20664 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Prim1P20664 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Prim1P20664 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Prim1P20664 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prim1P20664 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prim1P20664 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC21.13■□□□□ 0.97
Prim1P20664 Gm10052-201ENSMUST00000168019 960 ntBASIC21.13■□□□□ 0.97
Prim1P20664 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Prim1P20664 Gm27459-201ENSMUST00000184860 107 ntBASIC21.13■□□□□ 0.97
Prim1P20664 Gm44430-201ENSMUST00000203376 995 ntBASIC21.13■□□□□ 0.97
Prim1P20664 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC21.13■□□□□ 0.97
Prim1P20664 Gm7729-201ENSMUST00000050143 801 ntBASIC21.13■□□□□ 0.97
Prim1P20664 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prim1P20664 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prim1P20664 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prim1P20664 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prim1P20664 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prim1P20664 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prim1P20664 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC21.12■□□□□ 0.97
Prim1P20664 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prim1P20664 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC21.12■□□□□ 0.97
Prim1P20664 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Prim1P20664 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Prim1P20664 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Prim1P20664 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prim1P20664 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prim1P20664 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Prim1P20664 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Prim1P20664 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Prim1P20664 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prim1P20664 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
Prim1P20664 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prim1P20664 Gm13312-201ENSMUST00000119631 718 ntBASIC21.11■□□□□ 0.97
Prim1P20664 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prim1P20664 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Prim1P20664 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prim1P20664 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
Prim1P20664 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Prim1P20664 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prim1P20664 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC21.11■□□□□ 0.97
Prim1P20664 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Prim1P20664 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Prim1P20664 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Prim1P20664 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC21.1■□□□□ 0.97
Prim1P20664 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Prim1P20664 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prim1P20664 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Prim1P20664 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
Prim1P20664 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC21.1■□□□□ 0.97
Prim1P20664 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC21.1■□□□□ 0.97
Prim1P20664 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC21.1■□□□□ 0.97
Prim1P20664 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC21.1■□□□□ 0.97
Prim1P20664 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Prim1P20664 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prim1P20664 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prim1P20664 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prim1P20664 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Prim1P20664 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Prim1P20664 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prim1P20664 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prim1P20664 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Prim1P20664 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC21.09■□□□□ 0.97
Prim1P20664 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prim1P20664 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prim1P20664 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC21.09■□□□□ 0.97
Prim1P20664 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Prim1P20664 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prim1P20664 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prim1P20664 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prim1P20664 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prim1P20664 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms