Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgn1P18608 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgn1P18608 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgn1P18608 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn1P18608 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn1P18608 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.29■□□□□ 0.04
Hmgn1P18608 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn1P18608 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn1P18608 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn1P18608 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn1P18608 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn1P18608 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn1P18608 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn1P18608 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn1P18608 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn1P18608 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Hmgn1P18608 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn1P18608 Gm27405-201ENSMUST00000184201 112 ntBASIC15.29■□□□□ 0.04
Hmgn1P18608 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.29■□□□□ 0.04
Hmgn1P18608 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn1P18608 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.29■□□□□ 0.04
Hmgn1P18608 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn1P18608 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.29■□□□□ 0.04
Hmgn1P18608 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn1P18608 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn1P18608 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn1P18608 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.29■□□□□ 0.04
Hmgn1P18608 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Hmgn1P18608 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgn1P18608 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgn1P18608 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Hmgn1P18608 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Hmgn1P18608 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Hmgn1P18608 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgn1P18608 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgn1P18608 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgn1P18608 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Hmgn1P18608 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgn1P18608 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgn1P18608 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgn1P18608 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgn1P18608 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgn1P18608 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgn1P18608 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgn1P18608 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.28■□□□□ 0.04
Hmgn1P18608 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Hmgn1P18608 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgn1P18608 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgn1P18608 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Hmgn1P18608 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgn1P18608 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Hmgn1P18608 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgn1P18608 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgn1P18608 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgn1P18608 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgn1P18608 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgn1P18608 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgn1P18608 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgn1P18608 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgn1P18608 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgn1P18608 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgn1P18608 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgn1P18608 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgn1P18608 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgn1P18608 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgn1P18608 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgn1P18608 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgn1P18608 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgn1P18608 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgn1P18608 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgn1P18608 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgn1P18608 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.27■□□□□ 0.04
Hmgn1P18608 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgn1P18608 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgn1P18608 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmgn1P18608 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Hmgn1P18608 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmgn1P18608 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmgn1P18608 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmgn1P18608 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.27■□□□□ 0.03
Hmgn1P18608 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.27■□□□□ 0.03
Hmgn1P18608 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.27■□□□□ 0.03
Hmgn1P18608 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.27■□□□□ 0.03
Hmgn1P18608 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.26■□□□□ 0.03
Hmgn1P18608 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgn1P18608 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgn1P18608 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgn1P18608 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgn1P18608 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgn1P18608 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.26■□□□□ 0.03
Hmgn1P18608 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.26■□□□□ 0.03
Hmgn1P18608 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgn1P18608 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgn1P18608 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgn1P18608 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgn1P18608 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgn1P18608 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.26■□□□□ 0.03
Hmgn1P18608 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.26■□□□□ 0.03
Hmgn1P18608 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Hmgn1P18608 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms