Protein–RNA interactions for Protein: P0DP28

Calm3, Calmodulin-3, mousemouse

Known RBP Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calm3P0DP28 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Calm3P0DP28 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Calm3P0DP28 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Calm3P0DP28 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Calm3P0DP28 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Calm3P0DP28 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Calm3P0DP28 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Calm3P0DP28 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Calm3P0DP28 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Calm3P0DP28 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Calm3P0DP28 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Calm3P0DP28 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Calm3P0DP28 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Calm3P0DP28 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Calm3P0DP28 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Calm3P0DP28 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Calm3P0DP28 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Calm3P0DP28 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Calm3P0DP28 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Calm3P0DP28 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Calm3P0DP28 AA414768-201ENSMUST00000121924 1257 ntBASIC19.23■□□□□ 0.67
Calm3P0DP28 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.23■□□□□ 0.67
Calm3P0DP28 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.23■□□□□ 0.67
Calm3P0DP28 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Calm3P0DP28 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.23■□□□□ 0.67
Calm3P0DP28 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Calm3P0DP28 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Calm3P0DP28 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Calm3P0DP28 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Calm3P0DP28 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Calm3P0DP28 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Calm3P0DP28 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Calm3P0DP28 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Calm3P0DP28 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Calm3P0DP28 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Calm3P0DP28 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Calm3P0DP28 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Calm3P0DP28 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.22■□□□□ 0.67
Calm3P0DP28 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.22■□□□□ 0.67
Calm3P0DP28 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Calm3P0DP28 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Calm3P0DP28 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Calm3P0DP28 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Calm3P0DP28 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.22■□□□□ 0.67
Calm3P0DP28 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Calm3P0DP28 Gm7977-201ENSMUST00000193787 748 ntBASIC19.22■□□□□ 0.67
Calm3P0DP28 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Calm3P0DP28 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.22■□□□□ 0.67
Calm3P0DP28 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Calm3P0DP28 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Calm3P0DP28 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Calm3P0DP28 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Calm3P0DP28 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Calm3P0DP28 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Calm3P0DP28 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Calm3P0DP28 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.21■□□□□ 0.67
Calm3P0DP28 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Calm3P0DP28 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Calm3P0DP28 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Calm3P0DP28 Gm13216-201ENSMUST00000117145 591 ntBASIC19.21■□□□□ 0.67
Calm3P0DP28 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Calm3P0DP28 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Calm3P0DP28 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Calm3P0DP28 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Calm3P0DP28 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Calm3P0DP28 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Calm3P0DP28 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Calm3P0DP28 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Calm3P0DP28 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Calm3P0DP28 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.21■□□□□ 0.67
Calm3P0DP28 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Calm3P0DP28 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Calm3P0DP28 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Calm3P0DP28 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Calm3P0DP28 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.2■□□□□ 0.66
Calm3P0DP28 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Calm3P0DP28 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Calm3P0DP28 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Calm3P0DP28 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.2■□□□□ 0.66
Calm3P0DP28 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Calm3P0DP28 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Calm3P0DP28 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Calm3P0DP28 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Calm3P0DP28 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.19■□□□□ 0.66
Calm3P0DP28 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Calm3P0DP28 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Calm3P0DP28 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Calm3P0DP28 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Calm3P0DP28 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Calm3P0DP28 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.19■□□□□ 0.66
Calm3P0DP28 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Calm3P0DP28 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Calm3P0DP28 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Calm3P0DP28 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Calm3P0DP28 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Calm3P0DP28 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Calm3P0DP28 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Calm3P0DP28 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Calm3P0DP28 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Calm3P0DP28 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms